fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003485 not found in 331aa AT3G02860.2 1st_not 0.471590909 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02860.1     MDAQAKKKAMFRSKLNAKKKDTRIDSPLVRYNESDQPVCRVCNVVLKSESLWDVHQASRK
pt003485_POPTR_ MDA-AKKKALFRSKLNAQRKEKKIDSPLVRYNELDQPVCRVCDVVLKSEFQWDAHQASRK
                *** *****:*******::*:.:********** ********:******  **.******

AT3G02860.1     HHEAIDSLKASAA-------------GVQRGSKPAET---RPTKIEALAKSSNSQTSSGL
pt003485_POPTR_ HIEAINNIKANAARLKNVNNAKSEPSAVSTGSKHADNAQLQVAKSESLTQLPRPQ--SAL
                * ***:.:**.**             .*. *** *:.   : :* *:*:: ...*  *.*

AT3G02860.1     PPNFFENREPARE-VEPAKSKNLEQSKHTIGSETNKS--------KGPLPAGFFDNQKTD
pt003485_POPTR_ PPDFFDNKEAKRQKTDAVKPSELDSSLKPAGSIQTKATRSLLEDETGGLPSGNHLQTKNT
                **:**:*:*. *: .:..*..:*:.* :. **  .*:        .* **:* . : *. 

AT3G02860.1     SSNTKTTSEPKQSQTQTTGPETKPMVNGNLPTGFFDNKEADLLAHGIKLVKPDIKDEYKE
pt003485_POPTR_ EDARGITNTPTPTPTEISDSQAK-QGQGALPEGFFDNKEADLRARGIKPVKPDVNDEYKE
                ..    *. *. : *: :..::*   :* ** ********** *:*** ****::*****

AT3G02860.1     FEKLIQDDLQVVDSRMEEEEVDAAETIEEEEQREQRSYKEKVEILKRKKMELKAARLAKR
pt003485_POPTR_ FEKLIQGDLREVDDRLEEEEVDAAETIEEAETLEQKAYRERVELLKKKKMELMAARASER
                ******.**: **.*:************* *  **::*:*:**:**:***** *** ::*

AT3G02860.1     SKTSEGSVKKPKKTEEESPSDEEDDEDSAVDWRAQHL
pt003485_POPTR_ SKGSE--VASKESSHEDSSSDDDSDVNFAVDWRAQHL
                ** **  * . :.:.*:*.**::.* : *********
BoxShade v3.31 C (beta, 970507) Output
AT3G02860.1     M D A Q A K K K A M F R S K L N A K K K D T R I D S P L V R Y N E S D Q P V C R V C N V V L K S E S L W D V H Q A S R K
pt003485_POPTR_    M D A - A K K K A L F R S K L N A Q R K E K K I D S P L V R Y N E L D Q P V C R V C D V V L K S E F Q W D A H Q A S R K
 
AT3G02860.1     H H E A I D S L K A S A A - - - - - - - - - - - - - G V Q R G S K P A E T - - - R P T K I E A L A K S S N S Q T S S G L
pt003485_POPTR_    H I E A I N N I K A N A A R L K N V N N A K S E P S A V S T G S K H A D N A Q L Q V A K S E S L T Q L P R P Q - - S A L
 
AT3G02860.1     P P N F F E N R E P A R E - V E P A K S K N L E Q S K H T I G S E T N K S - - - - - - - - K G P L P A G F F D N Q K T D
pt003485_POPTR_    P P D F F D N K E A K R Q K T D A V K P S E L D S S L K P A G S I Q T K A T R S L L E D E T G G L P S G N H L Q T K N T
 
AT3G02860.1     S S N T K T T S E P K Q S Q T Q T T G P E T K P M V N G N L P T G F F D N K E A D L L A H G I K L V K P D I K D E Y K E
pt003485_POPTR_    E D A R G I T N T P T P T P T E I S D S Q A K - Q G Q G A L P E G F F D N K E A D L R A R G I K P V K P D V N D E Y K E
 
AT3G02860.1     F E K L I Q D D L Q V V D S R M E E E E V D A A E T I E E E E Q R E Q R S Y K E K V E I L K R K K M E L K A A R L A K R
pt003485_POPTR_    F E K L I Q G D L R E V D D R L E E E E V D A A E T I E E A E T L E Q K A Y R E R V E L L K K K K M E L M A A R A S E R
 
AT3G02860.1     S K T S E G S V K K P K K T E E E S P S D E E D D E D S A V D W R A Q H L
pt003485_POPTR_    S K G S E - - V A S K E S S H E D S S S D D D S D V N F A V D W R A Q H L
 
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