fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044971 not found in 326aa AT3G02860.2 1st_not 0.496212121 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02860.1     MDAQAKKKAMFRSKLNAKKKDTRIDSPLVRYNESDQPVCRVCNVVLKSESLWDVHQASRK
gm044971_Glyma1 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRK
                *********:**:****:**:.**:******** ********:**********.**.***

AT3G02860.1     HHEAIDSLKASAAGVQR--GSKP----------------AETRPTKIEALAKSSNSQTSS
gm044971_Glyma1 HREAISNLKANAAGLTQHNNAKPVADSSFSKAKPEHSLDSQFKPPEASQLV--SKPQSSS
                *:***..***.***: :  .:**                :: :*.: . *.  *:.*:**

AT3G02860.1     GLPPNFFENREPAREVEPAKSKNLEQS----KHTIGSETNKSKGPLPAGFFDNQKTDSSN
gm044971_Glyma1 VLPPGFFDDSDSGK----TRSEHLVDSDLGRKAGVSAKSQVSNLEKDKGQFDDNNVAKSN
                 ***.**:: :..:    ::*::* :*    *  :.:::: *:     * **:::. .**

AT3G02860.1     -TKTTSEPKQSQTQTTGPETKPMVNGNLPTGFFDNKEADLLAHGIKLVKPDIKDEYKEFE
gm044971_Glyma1 VSQATTDSRQTSVKTTDTEIQ-QVKGILPEGFFDNKEADLRARGIKLVKPDVKDEYKEFE
                 :::*::.:*:..:**..* :  *:* ** ********** *:********:********

AT3G02860.1     KLIQDDLQVVDSRMEEEEVDAAETIEEEEQREQRSYKEKVEILKRKKMELKAARLAKRSK
gm044971_Glyma1 KLIQEDLQEVDDRLEEEEIDAAEMIEEEEVVEQKMLSEKVEMLKKRRLELKAANAAKRSK
                ****:*** **.*:****:**** *****  **:  .****:**::::*****. *****

AT3G02860.1     TSEGSVKKPKKTEEESPSDEEDDEDSAVDWRAQHL
gm044971_Glyma1 SSEIVAKESR--QEESSSDDESEENFAVDWRAQHL
                :**  .*:.:  :***.**:*.:*: *********
BoxShade v3.31 C (beta, 970507) Output
AT3G02860.1     M D A Q A K K K A M F R S K L N A K K K D T R I D S P L V R Y N E S D Q P V C R V C N V V L K S E S L W D V H Q A S R K
gm044971_Glyma1    M D A Q A K K K A L F R A K L N A Q K K E K R I E S P L V R Y N E F D Q P V C R V C D V V L K S E S L W D A H Q V S R K
 
AT3G02860.1     H H E A I D S L K A S A A G V Q R - - G S K P - - - - - - - - - - - - - - - - A E T R P T K I E A L A K S S N S Q T S S
gm044971_Glyma1    H R E A I S N L K A N A A G L T Q H N N A K P V A D S S F S K A K P E H S L D S Q F K P P E A S Q L V - - S K P Q S S S
 
AT3G02860.1     G L P P N F F E N R E P A R E V E P A K S K N L E Q S - - - - K H T I G S E T N K S K G P L P A G F F D N Q K T D S S N
gm044971_Glyma1    V L P P G F F D D S D S G K - - - - T R S E H L V D S D L G R K A G V S A K S Q V S N L E K D K G Q F D D N N V A K S N
 
AT3G02860.1     - T K T T S E P K Q S Q T Q T T G P E T K P M V N G N L P T G F F D N K E A D L L A H G I K L V K P D I K D E Y K E F E
gm044971_Glyma1    V S Q A T T D S R Q T S V K T T D T E I Q - Q V K G I L P E G F F D N K E A D L R A R G I K L V K P D V K D E Y K E F E
 
AT3G02860.1     K L I Q D D L Q V V D S R M E E E E V D A A E T I E E E E Q R E Q R S Y K E K V E I L K R K K M E L K A A R L A K R S K
gm044971_Glyma1    K L I Q E D L Q E V D D R L E E E E I D A A E M I E E E E V V E Q K M L S E K V E M L K K R R L E L K A A N A A K R S K
 
AT3G02860.1     T S E G S V K K P K K T E E E S P S D E E D D E D S A V D W R A Q H L
gm044971_Glyma1    S S E I V A K E S R - - Q E E S S S D D E S E E N F A V D W R A Q H L
 
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