fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032378 not found in 352aa AT3G02940.1 1st_1st 0.477049180 Ia
Pt013140 not found in 300aa AT3G02940.1 1st_1st 0.467213114 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02940.1     -MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTN
gm032378_Glyma1 MMGRTPCSDENGLKKGPWTPEEDRILVDYIQKHGHGSWRALPKHAGLNRCGKSCRLRWTN
pt013140_POPTR_ -MAESPFQDESALKKGPWTPEEDQKLIDYVQKHGHGSWRALPMLAGLNRCGKSCRLRWTN
                 *..:*  **..***********: *:::::***********  ****************

AT3G02940.1     YLRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKLIQM
gm032378_Glyma1 YLRPDIKRGKFSEEEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQM
pt013140_POPTR_ YLRPDIKRGNFSEEEQQMIIDFHQVLGNKWSAIAQHLPGRTDNEIKNFWNTHLKKKLLQM
                *********:*: **:* **::* :******:** ************:****::***:**

AT3G02940.1     GIDPVTHRPRTDHLNVLAALPQLLAAAN-FNNLLNL-----NQ-NIQLDATSVAKAQLLH
gm032378_Glyma1 GLDPVTHRPRSDHLNLLSNLQQLLAATNIVSNLTNT-WDTNNALRLQSDATQLAKLQLLQ
pt013140_POPTR_ GIDPVTHRPRTD-LNIIANLPQLLAAAANFSNLMNIPWD--NAIKAQVDAT---KLQLLH
                *:********:* **::: * *****:  ..** *      *  . * ***   * ***:

AT3G02940.1     SMIQVLSNNNTSSSFDIHH-----------------------TTNNLF-GQSSFLE-NLP
gm032378_Glyma1 NILHVLGDTTPTSNLDLLNPFGPSSSSLPDGFLNEVLGLNQSKLQNLYNGYSAQNQPNLQ
pt013140_POPTR_ NILQVLG------NKGLLK-------CGEDGLSSQ--------------GINAQAQSNFP
                .:::**.      . .: :                              * .:  : *: 

AT3G02940.1     NIENPYDQT---QGLSHIDDQPLDSFSSP------IRVVAYQHDQ--NFIPPLISTSPDE
gm032378_Glyma1 SFEPPHQQQVLPTGNQHMDGGSIDSSCMKPEKGDEQLDVPYSSSTPFNSLPNLVSASPEC
pt013140_POPTR_ NIDAPQQ--------PFSDHNPIKDSKSRTHNSD-QLVSSYAFPTS-NTLPQLVSASPEC
                .:: * :         . *  .:..              .*      * :* *:*:**: 

AT3G02940.1     SKETQMMVKNKEIMKYNDHTSNPSSTSTFTQDHQPWCDIIDDEASDSYWKEIIEQTCSEP
gm032378_Glyma1 STHVLMQMENK--VMPNE-CSDPSSSTSTN--FEMWGDFMYEEVSDAYWKDLIDKETN--
pt013140_POPTR_ SS------ANT--INPNDIISNPSNATSTT--FEAWRNLMDDGANDNYWIDIIE------
                *.       *.  :  *:  *:**.::: .  .: * ::: : ..* ** ::*:      

AT3G02940.1     WPFRE
gm032378_Glyma1 -----
pt013140_POPTR_ -----
BoxShade v3.31 C (beta, 970507) Output
AT3G02940.1     - M G R S P C C D E S G L K K G P W T P E E D Q K L I N H I R K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N
gm032378_Glyma1    M M G R T P C S D E N G L K K G P W T P E E D R I L V D Y I Q K H G H G S W R A L P K H A G L N R C G K S C R L R W T N
pt013140_POPTR_    - M A E S P F Q D E S A L K K G P W T P E E D Q K L I D Y V Q K H G H G S W R A L P M L A G L N R C G K S C R L R W T N
 
AT3G02940.1     Y L R P D I K R G N F T A E E E Q T I I N L H S L L G N K W S S I A G H L P G R T D N E I K N Y W N T H I R K K L I Q M
gm032378_Glyma1    Y L R P D I K R G K F S E E E E Q L I I N L H A V L G N K W S A I A G H L P G R T D N E I K N F W N T H L K K K L L Q M
pt013140_POPTR_    Y L R P D I K R G N F S E E E Q Q M I I D F H Q V L G N K W S A I A Q H L P G R T D N E I K N F W N T H L K K K L L Q M
 
AT3G02940.1     G I D P V T H R P R T D H L N V L A A L P Q L L A A A N - F N N L L N L - - - - - N Q - N I Q L D A T S V A K A Q L L H
gm032378_Glyma1    G L D P V T H R P R S D H L N L L S N L Q Q L L A A T N I V S N L T N T - W D T N N A L R L Q S D A T Q L A K L Q L L Q
pt013140_POPTR_    G I D P V T H R P R T D - L N I I A N L P Q L L A A A A N F S N L M N I P W D - - N A I K A Q V D A T - - - K L Q L L H
 
AT3G02940.1     S M I Q V L S N N N T S S S F D I H H - - - - - - - - - - - - - - - - - - - - - - - T T N N L F - G Q S S F L E - N L P
gm032378_Glyma1    N I L H V L G D T T P T S N L D L L N P F G P S S S S L P D G F L N E V L G L N Q S K L Q N L Y N G Y S A Q N Q P N L Q
pt013140_POPTR_    N I L Q V L G - - - - - - N K G L L K - - - - - - - C G E D G L S S Q - - - - - - - - - - - - - - G I N A Q A Q S N F P
 
AT3G02940.1     N I E N P Y D Q T - - - Q G L S H I D D Q P L D S F S S P - - - - - - I R V V A Y Q H D Q - - N F I P P L I S T S P D E
gm032378_Glyma1    S F E P P H Q Q Q V L P T G N Q H M D G G S I D S S C M K P E K G D E Q L D V P Y S S S T P F N S L P N L V S A S P E C
pt013140_POPTR_    N I D A P Q Q - - - - - - - - P F S D H N P I K D S K S R T H N S D - Q L V S S Y A F P T S - N T L P Q L V S A S P E C
 
AT3G02940.1     S K E T Q M M V K N K E I M K Y N D H T S N P S S T S T F T Q D H Q P W C D I I D D E A S D S Y W K E I I E Q T C S E P
gm032378_Glyma1    S T H V L M Q M E N K - - V M P N E - C S D P S S S T S T N - - F E M W G D F M Y E E V S D A Y W K D L I D K E T N - -
pt013140_POPTR_    S S - - - - - - A N T - - I N P N D I I S N P S N A T S T T - - F E A W R N L M D D G A N D N Y W I D I I E - - - - - -
 
AT3G02940.1     W P F R E
gm032378_Glyma1    - - - - -
pt013140_POPTR_    - - - - -
 
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