fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028194 not found in 336aa AT3G02940.1 not_1st 0.414754098 II
Pt010572 not found in 335aa AT3G02940.1 not_1st 0.4 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02940.1     MGRSPCCDE-SGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTN
pt010572_POPTR_ MVRSPCSPGASALKKGPWTPDEDEKLIDYIKRNGHENWKALPMLAGLNRCGKSCRLRWTN
pt028194_POPTR_ MVRSPRSHG-SDFKKGPWTPEEDEKLVDYIKRNGHENWKALPKLAGLNRCGKSCRLRWTN
                * *** .   * :*******:**:**:::*:::** .*:***  ****************

AT3G02940.1     YLRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKLIQM
pt010572_POPTR_ YLRPDIKRGKFSEEEERVIVNLHSALGNKWSRIANHLPGRTDNEIKNFWNTHIRKKLLQM
pt028194_POPTR_ YLRPDIKRGKFSEEEERVIVNLHSVLGNKWSRIANHLPGRTDNEIKNFWNTHIRKKLLQM
                *********:*: ***:.*:**** ****** **.************:*********:**

AT3G02940.1     GIDPVTHRPRTDHLNVLAALPQLLAAANFNNLLNLNQN---IQLDATSVAKAQLLHSMIQ
pt010572_POPTR_ GIDPNTHKPRTD-LSHFLNLSQLLGAAQFGNIASPWNNFLKLQAEATQLANIQLLRNLLQ
pt028194_POPTR_ GIDPNTHKPRTD-LDHFLNLSQFLGAAQFGNTADPLDNFLQLQADATQLANIQLLRNLLQ
                **** **:**** *. :  *.*:*.**:*.*  .  :*   :* :**.:*: ***:.::*

AT3G02940.1     VLSNNNTSSSFDIHHTTNNLFGQSS--FLENLPN-----------------IENP-----
pt010572_POPTR_ MM-NTNTLTNIE----SNSLLGSQNPHQFRGLVNGTTISNTNEP-TTISQDLVNPPVTPQ
pt028194_POPTR_ IM-NTNTLTNLE----NNSLLGSQNPNLFEGLGNGATICNTKEPFNPVSQDLFNPLATPQ
                :: *.** :.::    .*.*:*...   :..* *                 : **     

AT3G02940.1     --YDQTQGLS---------------HIDDQPLDSFSSPIRVVAY--QHDQNFIPPLI--S
pt010572_POPTR_ V-HNDFQAISKLWASCEGGFGPEGLNINGDTLSS--------SYGIQTEQNPLPALVSAS
pt028194_POPTR_ APPNDFQAISNLWASYEGGFGPEGLNINNNSLSS--------SYGTQTDQNPLPALVSAS
                   :: *.:*               :*:.:.*.*        :*  * :** :*.*:  *

AT3G02940.1     TSPDESKETQMMVKNKEIMKYNDHTSNPSSTSTFTQDH---QPWCDIIDDEASDSYWKEI
pt010572_POPTR_ TSPVTSIDYQ-----------TERKGDPSNYSTGTPTSTIFEAWEKLIDDDNYSSYWNDI
pt028194_POPTR_ TSPGTSIVNQ-----------KESKGNPSNYSTGTPTYTVFEGWEKLIDDDYYSSYWKDI
                ***  *   *           .: ..:**. ** *      : * .:***:  .***::*

AT3G02940.1     IEQTCSEPWPFRE
pt010572_POPTR_ LE-----------
pt028194_POPTR_ LE-----------
                :*
BoxShade v3.31 C (beta, 970507) Output
AT3G02940.1     M G R S P C C D E - S G L K K G P W T P E E D Q K L I N H I R K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N
pt010572_POPTR_    M V R S P C S P G A S A L K K G P W T P D E D E K L I D Y I K R N G H E N W K A L P M L A G L N R C G K S C R L R W T N
pt028194_POPTR_    M V R S P R S H G - S D F K K G P W T P E E D E K L V D Y I K R N G H E N W K A L P K L A G L N R C G K S C R L R W T N
 
AT3G02940.1     Y L R P D I K R G N F T A E E E Q T I I N L H S L L G N K W S S I A G H L P G R T D N E I K N Y W N T H I R K K L I Q M
pt010572_POPTR_    Y L R P D I K R G K F S E E E E R V I V N L H S A L G N K W S R I A N H L P G R T D N E I K N F W N T H I R K K L L Q M
pt028194_POPTR_    Y L R P D I K R G K F S E E E E R V I V N L H S V L G N K W S R I A N H L P G R T D N E I K N F W N T H I R K K L L Q M
 
AT3G02940.1     G I D P V T H R P R T D H L N V L A A L P Q L L A A A N F N N L L N L N Q N - - - I Q L D A T S V A K A Q L L H S M I Q
pt010572_POPTR_    G I D P N T H K P R T D - L S H F L N L S Q L L G A A Q F G N I A S P W N N F L K L Q A E A T Q L A N I Q L L R N L L Q
pt028194_POPTR_    G I D P N T H K P R T D - L D H F L N L S Q F L G A A Q F G N T A D P L D N F L Q L Q A D A T Q L A N I Q L L R N L L Q
 
AT3G02940.1     V L S N N N T S S S F D I H H T T N N L F G Q S S - - F L E N L P N - - - - - - - - - - - - - - - - - I E N P - - - - -
pt010572_POPTR_    M M - N T N T L T N I E - - - - S N S L L G S Q N P H Q F R G L V N G T T I S N T N E P - T T I S Q D L V N P P V T P Q
pt028194_POPTR_    I M - N T N T L T N L E - - - - N N S L L G S Q N P N L F E G L G N G A T I C N T K E P F N P V S Q D L F N P L A T P Q
 
AT3G02940.1     - - Y D Q T Q G L S - - - - - - - - - - - - - - - H I D D Q P L D S F S S P I R V V A Y - - Q H D Q N F I P P L I - - S
pt010572_POPTR_    V - H N D F Q A I S K L W A S C E G G F G P E G L N I N G D T L S S - - - - - - - - S Y G I Q T E Q N P L P A L V S A S
pt028194_POPTR_    A P P N D F Q A I S N L W A S Y E G G F G P E G L N I N N N S L S S - - - - - - - - S Y G T Q T D Q N P L P A L V S A S
 
AT3G02940.1     T S P D E S K E T Q M M V K N K E I M K Y N D H T S N P S S T S T F T Q D H - - - Q P W C D I I D D E A S D S Y W K E I
pt010572_POPTR_    T S P V T S I D Y Q - - - - - - - - - - - T E R K G D P S N Y S T G T P T S T I F E A W E K L I D D D N Y S S Y W N D I
pt028194_POPTR_    T S P G T S I V N Q - - - - - - - - - - - K E S K G N P S N Y S T G T P T Y T V F E G W E K L I D D D Y Y S S Y W K D I
 
AT3G02940.1     I E Q T C S E P W P F R E
pt010572_POPTR_    L E - - - - - - - - - - -
pt028194_POPTR_    L E - - - - - - - - - - -
 
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