fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os024169 not found in 322aa AT1G34670.1 not_not 0.406557377 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02940.1     MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY
Os024169_Os06t0 MGRPPCCDENGLKKGPWTPEEDEKLMSYIQKHGHASWRVLPELAGLNRCGKSCRLRWTNY
                ***.*****.************:**:.:*:****.***.**: *****************

AT3G02940.1     LRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKLIQMG
Os024169_Os06t0 LKPDIKRGNFSREEEQTILQLHSILGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMG
                *:********: ******::***:******:** ************:****:*****:**

AT3G02940.1     IDPVTHRPRTDHLNVLAALPQLLAAANFNNLLNLN------QNIQLDATSVAKAQ----L
Os024169_Os06t0 IDPMTHCPRTDFFQ---SLPQLIALANLRQIIERQPWDGHIEGLQTVAVQAAKLEYMQSL
                ***:** ****.::   :****:* **:.:::: :      :.:*  *...** :    *

AT3G02940.1     LHSMIQVLSNNNTSSSFDIHHTTNNLFGQSSFLENLPNIENPYDQTQGLSHIDDQPLDSF
Os024169_Os06t0 LHSAVSIVTSPTTTT------TTSSL---NTFTTEL-------EQT---NHLCPPQVPSS
                *** :.:::. .*::      **..*   .:*  :*       :**   .*:    : * 

AT3G02940.1     SSPIRVVAYQHDQNFIPPLISTSPD-ESKETQMMVKNKEIMKYNDHTS----NPSSTSTF
Os024169_Os06t0 SVPELAVQVPHSQ-----MPSTSFDQEIGKTNLFSNN--IVNGNEWCSMEADNSSQKSLL
                * *  .*   *.*     : *** * *  :*::: :*  *:: *:  *    *.*..* :

AT3G02940.1     TQDH----------QPWCDIIDDEASDS-------YWKEII--EQTCSEPWPFRE
Os024169_Os06t0 VPENSIPPLIDMPVQNFCNTISTPNCDGGNSIPLPSWSEILLDEELMGE---FA-
                . ::          * :*: *.   .*.        *.**:  *:  .*   *
BoxShade v3.31 C (beta, 970507) Output
AT3G02940.1     M G R S P C C D E S G L K K G P W T P E E D Q K L I N H I R K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N Y
Os024169_Os06t0    M G R P P C C D E N G L K K G P W T P E E D E K L M S Y I Q K H G H A S W R V L P E L A G L N R C G K S C R L R W T N Y
 
AT3G02940.1     L R P D I K R G N F T A E E E Q T I I N L H S L L G N K W S S I A G H L P G R T D N E I K N Y W N T H I R K K L I Q M G
Os024169_Os06t0    L K P D I K R G N F S R E E E Q T I L Q L H S I L G N K W S A I A K H L P G R T D N E I K N F W N T H L R K K L I K M G
 
AT3G02940.1     I D P V T H R P R T D H L N V L A A L P Q L L A A A N F N N L L N L N - - - - - - Q N I Q L D A T S V A K A Q - - - - L
Os024169_Os06t0    I D P M T H C P R T D F F Q - - - S L P Q L I A L A N L R Q I I E R Q P W D G H I E G L Q T V A V Q A A K L E Y M Q S L
 
AT3G02940.1     L H S M I Q V L S N N N T S S S F D I H H T T N N L F G Q S S F L E N L P N I E N P Y D Q T Q G L S H I D D Q P L D S F
Os024169_Os06t0    L H S A V S I V T S P T T T T - - - - - - T T S S L - - - N T F T T E L - - - - - - - E Q T - - - N H L C P P Q V P S S
 
AT3G02940.1     S S P I R V V A Y Q H D Q N F I P P L I S T S P D - E S K E T Q M M V K N K E I M K Y N D H T S - - - - N P S S T S T F
Os024169_Os06t0    S V P E L A V Q V P H S Q - - - - - M P S T S F D Q E I G K T N L F S N N - - I V N G N E W C S M E A D N S S Q K S L L
 
AT3G02940.1     T Q D H - - - - - - - - - - Q P W C D I I D D E A S D S - - - - - - - Y W K E I I - - E Q T C S E P W P F R E
Os024169_Os06t0    V P E N S I P P L I D M P V Q N F C N T I S T P N C D G G N S I P L P S W S E I L L D E E L M G E - - - F A -
 
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