fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032378 not found in 352aa AT3G02940.1 1st_1st 0.477049180 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02940.1     -MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTN
gm032378_Glyma1 MMGRTPCSDENGLKKGPWTPEEDRILVDYIQKHGHGSWRALPKHAGLNRCGKSCRLRWTN
                 ***:**.**.************: *:::*:************:****************

AT3G02940.1     YLRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKLIQM
gm032378_Glyma1 YLRPDIKRGKFSEEEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQM
                *********:*: **** *****::******:***************:****::***:**

AT3G02940.1     GIDPVTHRPRTDHLNVLAALPQLLAAANF----------NNLLNLNQNIQLDATSVAKAQ
gm032378_Glyma1 GLDPVTHRPRSDHLNLLSNLQQLLAATNIVSNLTNTWDTNNALRL----QSDATQLAKLQ
                *:********:****:*: * *****:*:          ** *.*    * ***.:** *

AT3G02940.1     LLHSMIQVLSNNNTSSSFDIHHTTNNLFGQSS------FL--------------------
gm032378_Glyma1 LLQNILHVLGDTTPTSNLDLL----NPFGPSSSSLPDGFLNEVLGLNQSKLQNLYNGYSA
                **:.:::**.:...:*.:*:     * ** **      **                    

AT3G02940.1     ENLPNIEN--PYDQTQ----GLSHID--------------DQPLD---SFSSPIRVVAYQ
gm032378_Glyma1 QNQPNLQSFEPPHQQQVLPTGNQHMDGGSIDSSCMKPEKGDEQLDVPYSSSTPF------
                :* **::.  * .* *    * .*:*              *: **   * *:*:      

AT3G02940.1     HDQNFIPPLISTSPDESKETQMMVKNKEIMKYNDHTSNPSSTSTFTQDHQPWCDIIDDEA
gm032378_Glyma1 ---NSLPNLVSASPECSTHVLMQMENK-VMP--NECSDPSSST--STNFEMWGDFMYEEV
                   * :* *:*:**: *... * ::** :*   :. *:***::  : :.: * *:: :*.

AT3G02940.1     SDSYWKEIIEQTCSEPWPFRE
gm032378_Glyma1 SDAYWKDLIDKETN-------
                **:***::*::  .
BoxShade v3.31 C (beta, 970507) Output
AT3G02940.1     - M G R S P C C D E S G L K K G P W T P E E D Q K L I N H I R K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N
gm032378_Glyma1    M M G R T P C S D E N G L K K G P W T P E E D R I L V D Y I Q K H G H G S W R A L P K H A G L N R C G K S C R L R W T N
 
AT3G02940.1     Y L R P D I K R G N F T A E E E Q T I I N L H S L L G N K W S S I A G H L P G R T D N E I K N Y W N T H I R K K L I Q M
gm032378_Glyma1    Y L R P D I K R G K F S E E E E Q L I I N L H A V L G N K W S A I A G H L P G R T D N E I K N F W N T H L K K K L L Q M
 
AT3G02940.1     G I D P V T H R P R T D H L N V L A A L P Q L L A A A N F - - - - - - - - - - N N L L N L N Q N I Q L D A T S V A K A Q
gm032378_Glyma1    G L D P V T H R P R S D H L N L L S N L Q Q L L A A T N I V S N L T N T W D T N N A L R L - - - - Q S D A T Q L A K L Q
 
AT3G02940.1     L L H S M I Q V L S N N N T S S S F D I H H T T N N L F G Q S S - - - - - - F L - - - - - - - - - - - - - - - - - - - -
gm032378_Glyma1    L L Q N I L H V L G D T T P T S N L D L L - - - - N P F G P S S S S L P D G F L N E V L G L N Q S K L Q N L Y N G Y S A
 
AT3G02940.1     E N L P N I E N - - P Y D Q T Q - - - - G L S H I D - - - - - - - - - - - - - - D Q P L D - - - S F S S P I R V V A Y Q
gm032378_Glyma1    Q N Q P N L Q S F E P P H Q Q Q V L P T G N Q H M D G G S I D S S C M K P E K G D E Q L D V P Y S S S T P F - - - - - -
 
AT3G02940.1     H D Q N F I P P L I S T S P D E S K E T Q M M V K N K E I M K Y N D H T S N P S S T S T F T Q D H Q P W C D I I D D E A
gm032378_Glyma1    - - - N S L P N L V S A S P E C S T H V L M Q M E N K - V M P - - N E C S D P S S S T - - S T N F E M W G D F M Y E E V
 
AT3G02940.1     S D S Y W K E I I E Q T C S E P W P F R E
gm032378_Glyma1    S D A Y W K D L I D K E T N - - - - - - -
 
0