fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G03660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os029653 not found in 262aa AT3G03660.1 1st_1st 0.430875576 Ia
Gm005818 not found in 295aa AT3G03660.1 1st_1st 0.474654377 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G03660.1     MDQEQTPHSPTRHSRSPPSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEET
gm005818_Glyma0 -MEDQGQQQQQQHQVEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDET
Os029653_Os07t0 ---MDGGHSPDRHAAAA--------AGEPVRSRWTPKPEQILILESIFNSGMVNPPKDET
                    :  :.  :*   .         .*.*****:*************:********:**

AT3G03660.1     VRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRQRQL--QAAAAAADATTNTCD------Q
gm005818_Glyma0 VRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQQATATATATVTTFDHPQPQTQ
Os029653_Os07t0 VRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAA-------------
                *****:**:**************************:  *  :*:* *             

AT3G03660.1     TMM-VSNSLPH--------------HSGSDLGF-----GGCSTSSNYLF---ASSSSSYG
gm005818_Glyma0 TLVNVGGAIPHDHHTLGNLVVATESSATSTMGF------GCSSQSSYGFLGSSSSSSSCG
Os029653_Os07t0 ----SSGSPPT--ASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSW---PSSPPSVG
                     ..: *                . * :*:      * *:.*.  :   .**..* *

AT3G03660.1     --------GGCDNQSNSGMENLLT--MSGQMSYHEATHHHYQNHSSNVTSILCPSDQNSN
gm005818_Glyma0 --------GGVIGGQQQGMDGFFSSVSSHQMGFPD--HHHTSPASSALYPPLDP-----N
Os029653_Os07t0 MMMGDVDYGG-------GGDDLFA--ISRQMGYMDGGGGSSSSAAAGQH-------QQQQ
                        **       * :.:::   * **.: :      .  ::             :

AT3G03660.1     FQYQ--------QGAITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGFL
gm005818_Glyma0 LTYQAGYGGPNISGFITVFINGIATELPKGPIDLKTVFGEDVMLVHSSGVPIPTNEFGFL
Os029653_Os07t0 LYYSCQ------PATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGIL
                : *.         . :******:.**:.:* **::: **:*::****:*. :*::*:*:*

AT3G03660.1     MHSLQHGEAYFLVPRQT
gm005818_Glyma0 MHNLQHGDSYFLVSKPT
Os029653_Os07t0 LHSLQMGESYFLVTRSS
                :*.** *::****.: :
BoxShade v3.31 C (beta, 970507) Output
AT3G03660.1     M D Q E Q T P H S P T R H S R S P P S S A S G S T S A E P V R S R W S P K P E Q I L I L E S I F H S G M V N P P K E E T
gm005818_Glyma0    - M E D Q G Q Q Q Q Q Q H Q V E A K S P R Q G T E R S E A V R S R W T P K P E Q I L I L E S I F N S G M V N P P K D E T
Os029653_Os07t0    - - - M D G G H S P D R H A A A A - - - - - - - - A G E P V R S R W T P K P E Q I L I L E S I F N S G M V N P P K D E T
 
AT3G03660.1     V R I R K M L E K F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q L - - Q A A A A A A D A T T N T C D - - - - - - Q
gm005818_Glyma0    V R I R K L L E K F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q M M Q Q Q A T A T A T A T V T T F D H P Q P Q T Q
Os029653_Os07t0    V R I R K L L E R F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q L Q A Q A Q A A A A A A - - - - - - - - - - - - -
 
AT3G03660.1     T M M - V S N S L P H - - - - - - - - - - - - - - H S G S D L G F - - - - - G G C S T S S N Y L F - - - A S S S S S Y G
gm005818_Glyma0    T L V N V G G A I P H D H H T L G N L V V A T E S S A T S T M G F - - - - - - G C S S Q S S Y G F L G S S S S S S S C G
Os029653_Os07t0    - - - - S S G S P P T - - A S S G G L A P G H A G S P A S S L G M F A H G A A G Y S S S S S S S W - - - P S S P P S V G
 
AT3G03660.1     - - - - - - - - G G C D N Q S N S G M E N L L T - - M S G Q M S Y H E A T H H H Y Q N H S S N V T S I L C P S D Q N S N
gm005818_Glyma0    - - - - - - - - G G V I G G Q Q Q G M D G F F S S V S S H Q M G F P D - - H H H T S P A S S A L Y P P L D P - - - - - N
Os029653_Os07t0    M M M G D V D Y G G - - - - - - - G G D D L F A - - I S R Q M G Y M D G G G G S S S S A A A G Q H - - - - - - - Q Q Q Q
 
AT3G03660.1     F Q Y Q - - - - - - - - Q G A I T V F I N G V P T E V T R G G I D M K A T F G E D L V L V H S S G V P L P T D E F G F L
gm005818_Glyma0    L T Y Q A G Y G G P N I S G F I T V F I N G I A T E L P K G P I D L K T V F G E D V M L V H S S G V P I P T N E F G F L
Os029653_Os07t0    L Y Y S C Q - - - - - - P A T M T V F I N G V A T E V P R G P I D L R S M F G Q D V M L V H S T G A L L P A N E Y G I L
 
AT3G03660.1     M H S L Q H G E A Y F L V P R Q T
gm005818_Glyma0    M H N L Q H G D S Y F L V S K P T
Os029653_Os07t0    L H S L Q M G E S Y F L V T R S S
 
0