fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G03660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014132 not found in 255aa AT3G03660.2 1st_not 0.502304147 II
Pt013160 not found in 226aa AT3G03660.1 not_1st 0.474654377 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G03660.1     --MDQEQTPHSPTRHSRSPPSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKE
pt014132_POPTR_ MEDNQGQDPNSPSNH---------ATERSEPVRSRWTPKPEQILILESIFNSGMVNPPKD
pt013160_POPTR_ MEDNQGQDHNSQSNH---------GTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKN
                   :* *  :* :.*         .:  :*******:*************:********:

AT3G03660.1     ETVRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRQRQLQAAAAAADATTNTCDQTMMVSN
pt014132_POPTR_ ETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLVAGEQTNN---QQAQASG
pt013160_POPTR_ ETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQM------------------QASG
                *******:*****:***********************:                   .*.

AT3G03660.1     SLPHHSG--SDLGFGG----CSTSSNYLFASSSSSYGGGCDNQSNSGMENLLTMSGQMSY
pt014132_POPTR_ GAIQYKGCNTSIGFANSPSFVQSPSSYLVGSSSSYGVVDEDH----GGESLYSFSNQMAF
pt013160_POPTR_ G--------TSNGFAN------SPSSYLVGASSSCGVVGEDH----GVESLFSFSNQMGF
                .        :. **..      :.*.**..:***    . *:    * *.* ::*.**.:

AT3G03660.1     HEATHHHYQNHSSNVTSILCPSDQNSNFQYQQ-GAITVFINGVPTEVTRGGIDMKATFGE
pt014132_POPTR_ QEV------EQTSGVTSILYPS-ETSNLHYQTAGFITVFINGIPTEVPRGPLDIKAMFGQ
pt013160_POPTR_ QEF------EQTSGVTSIVCPS-ETSSLHYQTAGFITIFINGVPTEVPRVPLDVKAMFGQ
                :*       :::*.****: ** :.*.::**  * **:****:****.*  :*:** **:

AT3G03660.1     DLVLVHSSGVPLPTDEFGFLMHSLQHGEAYFLVPRQT-
pt014132_POPTR_ DVVLVHSSGVPVPTNEFGFLMQSLHHGESYFLVIISGA
pt013160_POPTR_ DVMLVHSSGVPVPTNEFGFLVQILHHGESYFLVNISAV
                *::********:**:*****:: *:***:****  .
BoxShade v3.31 C (beta, 970507) Output
AT3G03660.1     - - M D Q E Q T P H S P T R H S R S P P S S A S G S T S A E P V R S R W S P K P E Q I L I L E S I F H S G M V N P P K E
pt014132_POPTR_    M E D N Q G Q D P N S P S N H - - - - - - - - - A T E R S E P V R S R W T P K P E Q I L I L E S I F N S G M V N P P K D
pt013160_POPTR_    M E D N Q G Q D H N S Q S N H - - - - - - - - - G T E R S E P V R S R W T P K P E Q I L I L E S I F N S G M V N P P K N
 
AT3G03660.1     E T V R I R K M L E K F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q L Q A A A A A A D A T T N T C D Q T M M V S N
pt014132_POPTR_    E T V R I R K L L E K F G S V G D A N V F Y W F Q N R R S R S R R R Q R Q M Q A S L V A G E Q T N N - - - Q Q A Q A S G
pt013160_POPTR_    E T V R I R K L L E K F G S V G D A N V F Y W F Q N R R S R S R R R Q R Q M - - - - - - - - - - - - - - - - - - Q A S G
 
AT3G03660.1     S L P H H S G - - S D L G F G G - - - - C S T S S N Y L F A S S S S S Y G G G C D N Q S N S G M E N L L T M S G Q M S Y
pt014132_POPTR_    G A I Q Y K G C N T S I G F A N S P S F V Q S P S S Y L V G S S S S Y G V V D E D H - - - - G G E S L Y S F S N Q M A F
pt013160_POPTR_    G - - - - - - - - T S N G F A N - - - - - - S P S S Y L V G A S S S C G V V G E D H - - - - G V E S L F S F S N Q M G F
 
AT3G03660.1     H E A T H H H Y Q N H S S N V T S I L C P S D Q N S N F Q Y Q Q - G A I T V F I N G V P T E V T R G G I D M K A T F G E
pt014132_POPTR_    Q E V - - - - - - E Q T S G V T S I L Y P S - E T S N L H Y Q T A G F I T V F I N G I P T E V P R G P L D I K A M F G Q
pt013160_POPTR_    Q E F - - - - - - E Q T S G V T S I V C P S - E T S S L H Y Q T A G F I T I F I N G V P T E V P R V P L D V K A M F G Q
 
AT3G03660.1     D L V L V H S S G V P L P T D E F G F L M H S L Q H G E A Y F L V P R Q T -
pt014132_POPTR_    D V V L V H S S G V P V P T N E F G F L M Q S L H H G E S Y F L V I I S G A
pt013160_POPTR_    D V M L V H S S G V P V P T N E F G F L V Q I L H H G E S Y F L V N I S A V
 
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