fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G03660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005818 not found in 295aa AT3G03660.1 1st_1st 0.474654377 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G03660.1     MDQEQTPHSPTRHSRSPPSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEET
gm005818_Glyma0 -MEDQGQQQQQQHQVEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDET
                  ::*  :.  :*. .. *. .*:  :*.*****:*************:********:**

AT3G03660.1     VRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRQRQL--QAAAAAADATTNTCD------Q
gm005818_Glyma0 VRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQQATATATATVTTFDHPQPQTQ
                *****:*****************************:  * *:*:* **..* *      *

AT3G03660.1     TMM-VSNSLPH--------------HSGSDLGFGGCSTSSNYLF---ASSSSSYGGGCDN
gm005818_Glyma0 TLVNVGGAIPHDHHTLGNLVVATESSATSTMGF-GCSSQSSYGFLGSSSSSSSCGGGVIG
                *:: *..::**               : * :** ***:.*.* *   :***** ***  .

AT3G03660.1     QSNSGMENLLT--MSGQMSYHEATHHHYQNHSSNVTSILCPSDQNSNFQYQ--------Q
gm005818_Glyma0 GQQQGMDGFFSSVSSHQMGFPD--HHHTSPASSALYPPLDP-----NLTYQAGYGGPNIS
                 .:.**:.:::   * **.: :  *** .  ** : . * *     *: **        .

AT3G03660.1     GAITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGFLMHSLQHGEAYFLV
gm005818_Glyma0 GFITVFINGIATELPKGPIDLKTVFGEDVMLVHSSGVPIPTNEFGFLMHNLQHGDSYFLV
                * *******:.**:.:* **:*:.****::********:**:*******.****::****

AT3G03660.1     PRQT
gm005818_Glyma0 SKPT
                .: *
BoxShade v3.31 C (beta, 970507) Output
AT3G03660.1     M D Q E Q T P H S P T R H S R S P P S S A S G S T S A E P V R S R W S P K P E Q I L I L E S I F H S G M V N P P K E E T
gm005818_Glyma0    - M E D Q G Q Q Q Q Q Q H Q V E A K S P R Q G T E R S E A V R S R W T P K P E Q I L I L E S I F N S G M V N P P K D E T
 
AT3G03660.1     V R I R K M L E K F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q L - - Q A A A A A A D A T T N T C D - - - - - - Q
gm005818_Glyma0    V R I R K L L E K F G A V G D A N V F Y W F Q N R R S R S R R R Q R Q M M Q Q Q A T A T A T A T V T T F D H P Q P Q T Q
 
AT3G03660.1     T M M - V S N S L P H - - - - - - - - - - - - - - H S G S D L G F G G C S T S S N Y L F - - - A S S S S S Y G G G C D N
gm005818_Glyma0    T L V N V G G A I P H D H H T L G N L V V A T E S S A T S T M G F - G C S S Q S S Y G F L G S S S S S S S C G G G V I G
 
AT3G03660.1     Q S N S G M E N L L T - - M S G Q M S Y H E A T H H H Y Q N H S S N V T S I L C P S D Q N S N F Q Y Q - - - - - - - - Q
gm005818_Glyma0    G Q Q Q G M D G F F S S V S S H Q M G F P D - - H H H T S P A S S A L Y P P L D P - - - - - N L T Y Q A G Y G G P N I S
 
AT3G03660.1     G A I T V F I N G V P T E V T R G G I D M K A T F G E D L V L V H S S G V P L P T D E F G F L M H S L Q H G E A Y F L V
gm005818_Glyma0    G F I T V F I N G I A T E L P K G P I D L K T V F G E D V M L V H S S G V P I P T N E F G F L M H N L Q H G D S Y F L V
 
AT3G03660.1     P R Q T
gm005818_Glyma0    S K P T
 
0