fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034055 not found in 420aa AT3G04030.3 1st_not 0.517902813 II
Pt012490 not found in 420aa AT3G04030.3 1st_not 0.552429667 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04030.1     MYYQNQHQGKNILSSSRMHITSERHPFLR-GNSPGDSGLILSTDAKPRLKWTPDLHERFI
pt012490_POPTR_ MYQHHQHQGKNIHSSSRNSIPPERHLFLQVGNGPGDSGLVLSTDAKPRLKWTPDLHERFI
gm034055_Glyma1 MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI
                ** ::******* ****  *..*** **: **..*****:**************** ***

AT3G04030.1     EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM
pt012490_POPTR_ EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVAV
gm034055_Glyma1 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTYKITTSAS
                ****************:**:************************:**:*.   *    : 

AT3G04030.1     MEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLE------LRIEAQG
pt012490_POPTR_ VGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEAQG
gm034055_Glyma1 TGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQG
                  :: .:.:  : ::**:*.*.**.  :.****:********:****      *******

AT3G04030.1     KYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQ
pt012490_POPTR_ KYLQSVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSSKCLNSAFSELKDLQGLCPPL
gm034055_Glyma1 KYLQSVLEKAQETLGRQNLGVVGIEAAKVQLSELVSKVSSQCLNSAFTEPKDLQGFFPQQ
                ********************..*:***************::  **:* * *:**.: .  

AT3G04030.1     MQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEP-LFQRME
pt012490_POPTR_ TQPTHPNDCSMDSCLTSIEGSQKEQE-IHNTGMGLRPYNGNALLEPK-VIAGEHALQQTE
gm034055_Glyma1 TQTNPPNDCSMDSCLTSSDRSQKEQE-IQN---GLRHFNSHVFMEHKEATEAPNNLRNPE
                 *.. * ***::***** : :**:.: :.*   *** : ..   * *        ::. *

AT3G04030.1     LTWTEGLRGN-PYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQ--------QGN
pt012490_POPTR_ LKWGEDQRDNKMFLSSMRNDTDRRTFSAERSCSNLSIGVGLQGERGNVSSSFAEARFKGR
gm034055_Glyma1 LKWCEDGKKN-TFLAPLSKNEERRNYAAESSPNNLSMSIGLERETENGINLYPERLITES
                *.* *. : *  :*:.: .: ::*   :* * ..**:.:**. .  :             

AT3G04030.1     NEDHKLETRNRKGMDS--------------------TTELDLNTHVENYCTTRTKQFDLN
pt012490_POPTR_ SEDDSFQDKTNRRIDAIKLENEKLSPGYRL--SYY-ATKLDLNSHGEIDAASGCRQLDLN
gm034055_Glyma1 QSDGEFQHRNRIKPETLKPVDEKVSQDYRLPASYFAAARLDLNTHGDNEAATTCKQLDLN
                ..* .:: :..   ::                    ::.****:* :  .::  :*:***

AT3G04030.1     GFSWN
pt012490_POPTR_ GFSWN
gm034055_Glyma1 RFSWS
                 ***.
BoxShade v3.31 C (beta, 970507) Output
AT3G04030.1     M Y Y Q N Q H Q G K N I L S S S R M H I T S E R H P F L R - G N S P G D S G L I L S T D A K P R L K W T P D L H E R F I
pt012490_POPTR_    M Y Q H H Q H Q G K N I H S S S R N S I P P E R H L F L Q V G N G P G D S G L V L S T D A K P R L K W T P D L H E R F I
gm034055_Glyma1    M Y H H H Q H Q G K N I H S S S R M P I P S E R H M F L Q T G N G S G D S G L V L S T D A K P R L K W T P D L H A R F I
 
AT3G04030.1     E A V N Q L G G A D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N N S F N K I G I M T M
pt012490_POPTR_    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q A N S G S N K S G T V A V
gm034055_Glyma1    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q S N N V T Y K I T T S A S
 
AT3G04030.1     M E E K T P D A D E I Q S E N L S I G P Q P N K N S P I G E A L Q M Q I E V Q R R L H E Q L E - - - - - - L R I E A Q G
pt012490_POPTR_    V G D R M P E V N A T H I N N L S I G S Q T N K S L H F S E A L Q V Q I E V Q R R L H E Q L E V Q R H L Q L R I E A Q G
gm034055_Glyma1    T G E R L S E T N G T H M N K L S L G P Q A N K D L H I S E A L Q M Q I E V Q R R L N E Q L E V Q R H L Q L R I E A Q G
 
AT3G04030.1     K Y L Q S V L E K A Q E T L G R Q N L G A A G I E A A K V Q L S E L V S K V S A E Y P N S S F L E P K E L Q N L C S Q Q
pt012490_POPTR_    K Y L Q S V L E K A Q E T L G R Q N L G T V G L E A A K V Q L S E L V S K V S S K C L N S A F S E L K D L Q G L C P P L
gm034055_Glyma1    K Y L Q S V L E K A Q E T L G R Q N L G V V G I E A A K V Q L S E L V S K V S S Q C L N S A F T E P K D L Q G F F P Q Q
 
AT3G04030.1     M Q T N Y P P D C S L E S C L T S S E G T Q K N S K M L E N N R L G L R T Y I G D S T S E Q K E I M E E P - L F Q R M E
pt012490_POPTR_    T Q P T H P N D C S M D S C L T S I E G S Q K E Q E - I H N T G M G L R P Y N G N A L L E P K - V I A G E H A L Q Q T E
gm034055_Glyma1    T Q T N P P N D C S M D S C L T S S D R S Q K E Q E - I Q N - - - G L R H F N S H V F M E H K E A T E A P N N L R N P E
 
AT3G04030.1     L T W T E G L R G N - P Y L S T M V S E A E Q R I S Y S E R S P G R L S I G V G L H G H K S Q H Q - - - - - - - - Q G N
pt012490_POPTR_    L K W G E D Q R D N K M F L S S M R N D T D R R T F S A E R S C S N L S I G V G L Q G E R G N V S S S F A E A R F K G R
gm034055_Glyma1    L K W C E D G K K N - T F L A P L S K N E E R R N Y A A E S S P N N L S M S I G L E R E T E N G I N L Y P E R L I T E S
 
AT3G04030.1     N E D H K L E T R N R K G M D S - - - - - - - - - - - - - - - - - - - - T T E L D L N T H V E N Y C T T R T K Q F D L N
pt012490_POPTR_    S E D D S F Q D K T N R R I D A I K L E N E K L S P G Y R L - - S Y Y - A T K L D L N S H G E I D A A S G C R Q L D L N
gm034055_Glyma1    Q S D G E F Q H R N R I K P E T L K P V D E K V S Q D Y R L P A S Y F A A A R L D L N T H G D N E A A T T C K Q L D L N
 
AT3G04030.1     G F S W N
pt012490_POPTR_    G F S W N
gm034055_Glyma1    R F S W S
 
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