fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015112 not found in 427aa AT3G04030.3 not_not 0.551150895 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04030.1     MYYQNQHQGKNILSSSRMHITSERHPFLR-GNSPGDSGLILSTDAKPRLKWTPDLHERFI
pt015112_POPTR_ MYHHHQHQGKSIHSSSRMAIPPERHLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHERFI
                **:::*****.* ***** *..*** **: **.******:********************

AT3G04030.1     EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM
pt015112_POPTR_ EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVAV
                ****************:**:************************:**** . .*** :::

AT3G04030.1     MEEKTPDAD--EIQSENLSIGPQPNK-----NSPIGEALQMQIEVQRRLHEQLE------
pt015112_POPTR_ VGDRMPEANATHININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRHLQ
                : :: *:*:  .*: :*****.****     .  :.******************      

AT3G04030.1     LRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKEL
pt015112_POPTR_ LRIEAQGKYLQAVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSTQCLNSTFSELNDL
                ***********:***************:.*:***************::  **:* * ::*

AT3G04030.1     QNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEP
pt015112_POPTR_ QGLCPQQTPPTQPNDCSMDSCLTSCEGSQKEQE-IHNIGMGLRPCNSNALLEPKEIAEEH
                *.**.**  .. * ***::*****.**:**:.: :.*  :***.  .::  * *** ** 

AT3G04030.1     LFQRMELTWTEGLRGNP-YLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQ-----
pt015112_POPTR_ ALQQTELKWGEYLRDNKMFLTSIGHETERRTFSAERSCSDLSIGVGLQGEKGNINSSFAE
                 :*: **.* * **.*  :*:::  *:*:*   :*** . *******:*.*.: :     

AT3G04030.1     ---QGNNEDHKLETRNRKGMDS-----------------TTELDLNTHVENYCTTRTKQF
pt015112_POPTR_ GRFKGMSEDDSFQDQTNKRAESVKFEDEKMSPGYRLSYFTTKLDLNSHDEIDAASSCKQL
                   :* .**..:: :..*  :*                 **:****:* *  .::  **:

AT3G04030.1     DLNGFSWN
pt015112_POPTR_ DLNGFSWN
                ********
BoxShade v3.31 C (beta, 970507) Output
AT3G04030.1     M Y Y Q N Q H Q G K N I L S S S R M H I T S E R H P F L R - G N S P G D S G L I L S T D A K P R L K W T P D L H E R F I
pt015112_POPTR_    M Y H H H Q H Q G K S I H S S S R M A I P P E R H L F L Q G G N G P G D S G L V L S T D A K P R L K W T P D L H E R F I
 
AT3G04030.1     E A V N Q L G G A D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N N S F N K I G I M T M
pt015112_POPTR_    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q A N I G S S K I G T V A V
 
AT3G04030.1     M E E K T P D A D - - E I Q S E N L S I G P Q P N K - - - - - N S P I G E A L Q M Q I E V Q R R L H E Q L E - - - - - -
pt015112_POPTR_    V G D R M P E A N A T H I N I N N L S I G S Q P N K I L K S R S L H F S E A L Q M Q I E V Q R R L H E Q L E V Q R H L Q
 
AT3G04030.1     L R I E A Q G K Y L Q S V L E K A Q E T L G R Q N L G A A G I E A A K V Q L S E L V S K V S A E Y P N S S F L E P K E L
pt015112_POPTR_    L R I E A Q G K Y L Q A V L E K A Q E T L G R Q N L G T V G L E A A K V Q L S E L V S K V S T Q C L N S T F S E L N D L
 
AT3G04030.1     Q N L C S Q Q M Q T N Y P P D C S L E S C L T S S E G T Q K N S K M L E N N R L G L R T Y I G D S T S E Q K E I M E E P
pt015112_POPTR_    Q G L C P Q Q T P P T Q P N D C S M D S C L T S C E G S Q K E Q E - I H N I G M G L R P C N S N A L L E P K E I A E E H
 
AT3G04030.1     L F Q R M E L T W T E G L R G N P - Y L S T M V S E A E Q R I S Y S E R S P G R L S I G V G L H G H K S Q H Q - - - - -
pt015112_POPTR_    A L Q Q T E L K W G E Y L R D N K M F L T S I G H E T E R R T F S A E R S C S D L S I G V G L Q G E K G N I N S S F A E
 
AT3G04030.1     - - - Q G N N E D H K L E T R N R K G M D S - - - - - - - - - - - - - - - - - T T E L D L N T H V E N Y C T T R T K Q F
pt015112_POPTR_    G R F K G M S E D D S F Q D Q T N K R A E S V K F E D E K M S P G Y R L S Y F T T K L D L N S H D E I D A A S S C K Q L
 
AT3G04030.1     D L N G F S W N
pt015112_POPTR_    D L N G F S W N
 
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