fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034055 not found in 420aa AT3G04030.3 1st_not 0.517902813 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04030.1     MYYQNQHQGKNILSSSRMHITSERHPFLR-GNSPGDSGLILSTDAKPRLKWTPDLHERFI
gm034055_Glyma1 MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI
                **:::******* ***** *.**** **: **..*****:**************** ***

AT3G04030.1     EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM
gm034055_Glyma1 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTYKITTSAS
                ****************:**:************************:**:**   **   : 

AT3G04030.1     MEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLE------LRIEAQG
gm034055_Glyma1 TGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQG
                  *: .:::  : ::**:***.**:  *.*************:****      *******

AT3G04030.1     KYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQ
gm034055_Glyma1 KYLQSVLEKAQETLGRQNLGVVGIEAAKVQLSELVSKVSSQCLNSAFTEPKDLQGFFPQQ
                ********************..*****************::  **:* ***:**.: .**

AT3G04030.1     MQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEP-LFQRME
gm034055_Glyma1 TQTNPPNDCSMDSCLTSSDRSQKEQE-IQN---GLRHFNSHVFMEHKEATEAPNNLRNPE
                 *** * ***::******: :**:.: ::*   *** : ..   *:**  * *  ::. *

AT3G04030.1     LTWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNN--------
gm034055_Glyma1 LKWCEDGKKNTFLAPLSKNEERRNYAAESSPNNLSMSIGL---ERETENGINLYPERLIT
                *.* *. : *.:*:.: .: *:*   :* **..**:.:**   : : ::* *        

AT3G04030.1     ---EDHKLETRNR------KGMD--------------STTELDLNTHVENYCTTRTKQFD
gm034055_Glyma1 ESQSDGEFQHRNRIKPETLKPVDEKVSQDYRLPASYFAAARLDLNTHGDNEAATTCKQLD
                   .* ::: ***      * :*              :::.****** :* .:*  **:*

AT3G04030.1     LNGFSWN
gm034055_Glyma1 LNRFSWS
                ** ***.
BoxShade v3.31 C (beta, 970507) Output
AT3G04030.1     M Y Y Q N Q H Q G K N I L S S S R M H I T S E R H P F L R - G N S P G D S G L I L S T D A K P R L K W T P D L H E R F I
gm034055_Glyma1    M Y H H H Q H Q G K N I H S S S R M P I P S E R H M F L Q T G N G S G D S G L V L S T D A K P R L K W T P D L H A R F I
 
AT3G04030.1     E A V N Q L G G A D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N N S F N K I G I M T M
gm034055_Glyma1    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q S N N V T Y K I T T S A S
 
AT3G04030.1     M E E K T P D A D E I Q S E N L S I G P Q P N K N S P I G E A L Q M Q I E V Q R R L H E Q L E - - - - - - L R I E A Q G
gm034055_Glyma1    T G E R L S E T N G T H M N K L S L G P Q A N K D L H I S E A L Q M Q I E V Q R R L N E Q L E V Q R H L Q L R I E A Q G
 
AT3G04030.1     K Y L Q S V L E K A Q E T L G R Q N L G A A G I E A A K V Q L S E L V S K V S A E Y P N S S F L E P K E L Q N L C S Q Q
gm034055_Glyma1    K Y L Q S V L E K A Q E T L G R Q N L G V V G I E A A K V Q L S E L V S K V S S Q C L N S A F T E P K D L Q G F F P Q Q
 
AT3G04030.1     M Q T N Y P P D C S L E S C L T S S E G T Q K N S K M L E N N R L G L R T Y I G D S T S E Q K E I M E E P - L F Q R M E
gm034055_Glyma1    T Q T N P P N D C S M D S C L T S S D R S Q K E Q E - I Q N - - - G L R H F N S H V F M E H K E A T E A P N N L R N P E
 
AT3G04030.1     L T W T E G L R G N P Y L S T M V S E A E Q R I S Y S E R S P G R L S I G V G L H G H K S Q H Q Q G N N - - - - - - - -
gm034055_Glyma1    L K W C E D G K K N T F L A P L S K N E E R R N Y A A E S S P N N L S M S I G L - - - E R E T E N G I N L Y P E R L I T
 
AT3G04030.1     - - - E D H K L E T R N R - - - - - - K G M D - - - - - - - - - - - - - - S T T E L D L N T H V E N Y C T T R T K Q F D
gm034055_Glyma1    E S Q S D G E F Q H R N R I K P E T L K P V D E K V S Q D Y R L P A S Y F A A A R L D L N T H G D N E A A T T C K Q L D
 
AT3G04030.1     L N G F S W N
gm034055_Glyma1    L N R F S W S
 
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