fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013051 not found in 396aa AT5G18270.1 1st_not 0.453869047 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04060.1     MVEEGGVVVNQGGDQEVVDLPPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQADLNKN
pt013051_POPTR_ MTMEEAIVVNKGDD--LIDLPPGFRFHPTDEEIITHYLTEKVMNSSFCASAIGEVDLNKV
                *. * .:***:*.*  ::********************.***:*  * *:***:.**** 

AT3G04060.1     EPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNRATVSGYWKATGKDKEIFRGKGCLVGM
pt013051_POPTR_ EPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKHSLVGM
                ******* *******:******************** *************::** .****

AT3G04060.1     KKTLVFYTGRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARDEWVVCRVFHKNAPSTTI--
pt013051_POPTR_ KKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYYSLPKVARDEWVVCRIFHK---STGIKK
                *******.********:*********:**:**:.***.*********:***   ** *  

AT3G04060.1     TTTKQLSRIDSLDNIDHLLDFSSLPPLIDP-GFLGQPG-PSFSGA---------------
pt013051_POPTR_ TSIHDLLRVNSFG--DDFLDYSSLPPFMDPLNYNSRPSTSSFSGGDNNEFKEMATRSSDG
                *: ::* *::*:.  *.:**:*****::** .: .:*. .****.               

AT3G04060.1     ----------RQQHDLKPVLHHPTT---APVDNTYLPTQALNFPYHSVHNSGSDFGY---
pt013051_POPTR_ NYFSNTSMLNNNQNFAQP----PNTNYQAP-NSSFHPQIPASNPLYTFQTSPNMPGYLHQ
                          .:*:  :*    *.*   ** :.:: *  . . * ::.:.* .  **   

AT3G04060.1     GAGSGN------------NNKGMIK------------LE-----------HSLVSVSQET
pt013051_POPTR_ GKSSSNSFQNFQNSIFSDNEHTLLRSLARNSYREASGLEKQCKVERFSSNQSMVSLSQDT
                * .*.*            *:: :::            **           :*:**:**:*

AT3G04060.1     GLSSDVNTTATPEISSYPMMMNPAMMDGSKSACDGLDDLIFWEDLYTS------------
pt013051_POPTR_ GLSTDVNTTA--EISSVV----------SKQEI-GSHDKVF-EDLEGPSAGPIADLDCLW
                ***:******  ****            **.   * .* :* ***  .            

AT3G04060.1     --
pt013051_POPTR_ DY
BoxShade v3.31 C (beta, 970507) Output
AT3G04060.1     M V E E G G V V V N Q G G D Q E V V D L P P G F R F H P T D E E I I T H Y L K E K V F N I R F T A A A I G Q A D L N K N
pt013051_POPTR_    M T M E E A I V V N K G D D - - L I D L P P G F R F H P T D E E I I T H Y L T E K V M N S S F C A S A I G E V D L N K V
 
AT3G04060.1     E P W D L P K I A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T V S G Y W K A T G K D K E I F R G K G C L V G M
pt013051_POPTR_    E P W D L P K K A K M G E K E W Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I Y K G K H S L V G M
 
AT3G04060.1     K K T L V F Y T G R A P K G E K T N W V M H E Y R L D G K Y S Y H N L P K T A R D E W V V C R V F H K N A P S T T I - -
pt013051_POPTR_    K K T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y Y S L P K V A R D E W V V C R I F H K - - - S T G I K K
 
AT3G04060.1     T T T K Q L S R I D S L D N I D H L L D F S S L P P L I D P - G F L G Q P G - P S F S G A - - - - - - - - - - - - - - -
pt013051_POPTR_    T S I H D L L R V N S F G - - D D F L D Y S S L P P F M D P L N Y N S R P S T S S F S G G D N N E F K E M A T R S S D G
 
AT3G04060.1     - - - - - - - - - - R Q Q H D L K P V L H H P T T - - - A P V D N T Y L P T Q A L N F P Y H S V H N S G S D F G Y - - -
pt013051_POPTR_    N Y F S N T S M L N N N Q N F A Q P - - - - P N T N Y Q A P - N S S F H P Q I P A S N P L Y T F Q T S P N M P G Y L H Q
 
AT3G04060.1     G A G S G N - - - - - - - - - - - - N N K G M I K - - - - - - - - - - - - L E - - - - - - - - - - - H S L V S V S Q E T
pt013051_POPTR_    G K S S S N S F Q N F Q N S I F S D N E H T L L R S L A R N S Y R E A S G L E K Q C K V E R F S S N Q S M V S L S Q D T
 
AT3G04060.1     G L S S D V N T T A T P E I S S Y P M M M N P A M M D G S K S A C D G L D D L I F W E D L Y T S - - - - - - - - - - - -
pt013051_POPTR_    G L S T D V N T T A - - E I S S V V - - - - - - - - - - S K Q E I - G S H D K V F - E D L E G P S A G P I A D L D C L W
 
AT3G04060.1     - -
pt013051_POPTR_    D Y
 
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