fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014435 not found in 389aa AT5G18270.1 not_not 0.446428571 III
Pt023097 not found in 359aa AT5G61430.1 not_not 0.401785714 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04060.1     MVEEGGVVVNQGGDQEVVDLPPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQADLNKN
pt023097_POPTR_ -MENISGLGKEDDDK--MDLPPGFRFHPTDEELISHYLYKKVLDINFSARAIGDVDLNKS
pt014435_POPTR_ -MEE-AVVVNKGDDQ--IHLPAGFRFHPTDEEIISHYLTEKVMKSGFCAIAIGEVDLNKC
                 :*: . : ::..*:  :.**.**********:*:*** :**:.  * * ***:.**** 

AT3G04060.1     EPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNRATVSGYWKATGKDKEIFRGKGCLVGM
pt023097_POPTR_ EPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS-LVGM
pt014435_POPTR_ EPWDLPKKAKMGENEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIHKEKNCLVGM
                ***:**  *****:*:**** ********:****** :************.: *. ****

AT3G04060.1     KKTLVFYTGRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARDEWVVCRVFHKNAPSTTI--
pt023097_POPTR_ KKTLVFYKGRAPKGEKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK---SSAGKK
pt014435_POPTR_ KKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSYYSLPKVARDEWVVCRIFHK---STGMKK
                ******* ******************:**:* :.***.*::***:**:*:*   *:    

AT3G04060.1     TTTKQLSRIDSLDNIDHLLDFS--SLPPLIDP----------------------------
pt023097_POPTR_ TYISGLVRLGSFGN-----EFSPYGLPPLTDS--------SPSNGKIRPV-----AESAY
pt014435_POPTR_ TSIHDLLRMNSFG--DDFLDCS--SLPPLMDPPNYTSSFSDADNNEFKAMMTSRSSDGNY
                *    * *:.*:.      : *  .**** *.                            

AT3G04060.1     -----------GFLGQPGPSFSGARQQHDLKPVLHHPTTAPVDNTYLP--------TQAL
pt023097_POPTR_ VPCFSNLSDDQRNQQDTTDSFNN-----HLFAVSSNPSEVF---PRIPL-------LNSF
pt014435_POPTR_ FSNTSMLNNNQGFVQPPNTNYQTPNSSFHLQTPASNPLYTFQTNPNMPVYLQQGKSTNSF
                                .  .:.      .* .   :*  .    . :*         :::

AT3G04060.1     -NFPYHSVHNSGSDFGYGAGSGNNN---------------KGMIKLE-----HSLVSVSQ
pt023097_POPTR_ --YSPQAVAASGNLQYPGSVSIQDRSVLKALIENQGSNMKQQSSKLE-----RDMASVSQ
pt014435_POPTR_ PNFQNSTFGNNGQTLLRALAAGNNYG--------EASDQLGKQCKVEQFSSNQSMVSLSQ
                  :   :.  .*.    .  : ::                    *:*     :.:.*:**

AT3G04060.1     ETGLSSDVNTTATPEISSYPMMMNPAMMDGSKSACDGLDDLI--------------FWED
pt023097_POPTR_ DS--AADMNN----EISS---VISNLEAGKR-----SFDEQEAPPCTLVQSMDLDCFWN-
pt014435_POPTR_ DTGLSTDVNTTT--EISS---VVSKQEIGSHNEFYESLEDPLAGPIA-------DYMWD-
                ::  ::*:*.    ****   ::.    .       .:::                :*: 

AT3G04060.1     LYTS
pt023097_POPTR_ -Y--
pt014435_POPTR_ -Y--
                 *
BoxShade v3.31 C (beta, 970507) Output
AT3G04060.1     M V E E G G V V V N Q G G D Q E V V D L P P G F R F H P T D E E I I T H Y L K E K V F N I R F T A A A I G Q A D L N K N
pt023097_POPTR_    - M E N I S G L G K E D D D K - - M D L P P G F R F H P T D E E L I S H Y L Y K K V L D I N F S A R A I G D V D L N K S
pt014435_POPTR_    - M E E - A V V V N K G D D Q - - I H L P A G F R F H P T D E E I I S H Y L T E K V M K S G F C A I A I G E V D L N K C
 
AT3G04060.1     E P W D L P K I A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T V S G Y W K A T G K D K E I F R G K G C L V G M
pt023097_POPTR_    E P W E L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K S - L V G M
pt014435_POPTR_    E P W D L P K K A K M G E N E W Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I H K E K N C L V G M
 
AT3G04060.1     K K T L V F Y T G R A P K G E K T N W V M H E Y R L D G K Y S Y H N L P K T A R D E W V V C R V F H K N A P S T T I - -
pt023097_POPTR_    K K T L V F Y K G R A P K G E K T N W V M H E Y R L E G K F S A H N L P K T A K N E W V I C R V F Q K - - - S S A G K K
pt014435_POPTR_    K K T L V F Y R G R A P K G E K T N W V M H E Y R L E G K F S Y Y S L P K V A R D E W V V C R I F H K - - - S T G M K K
 
AT3G04060.1     T T T K Q L S R I D S L D N I D H L L D F S - - S L P P L I D P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023097_POPTR_    T Y I S G L V R L G S F G N - - - - - E F S P Y G L P P L T D S - - - - - - - - S P S N G K I R P V - - - - - A E S A Y
pt014435_POPTR_    T S I H D L L R M N S F G - - D D F L D C S - - S L P P L M D P P N Y T S S F S D A D N N E F K A M M T S R S S D G N Y
 
AT3G04060.1     - - - - - - - - - - - G F L G Q P G P S F S G A R Q Q H D L K P V L H H P T T A P V D N T Y L P - - - - - - - - T Q A L
pt023097_POPTR_    V P C F S N L S D D Q R N Q Q D T T D S F N N - - - - - H L F A V S S N P S E V F - - - P R I P L - - - - - - - L N S F
pt014435_POPTR_    F S N T S M L N N N Q G F V Q P P N T N Y Q T P N S S F H L Q T P A S N P L Y T F Q T N P N M P V Y L Q Q G K S T N S F
 
AT3G04060.1     - N F P Y H S V H N S G S D F G Y G A G S G N N N - - - - - - - - - - - - - - - K G M I K L E - - - - - H S L V S V S Q
pt023097_POPTR_    - - Y S P Q A V A A S G N L Q Y P G S V S I Q D R S V L K A L I E N Q G S N M K Q Q S S K L E - - - - - R D M A S V S Q
pt014435_POPTR_    P N F Q N S T F G N N G Q T L L R A L A A G N N Y G - - - - - - - - E A S D Q L G K Q C K V E Q F S S N Q S M V S L S Q
 
AT3G04060.1     E T G L S S D V N T T A T P E I S S Y P M M M N P A M M D G S K S A C D G L D D L I - - - - - - - - - - - - - - F W E D
pt023097_POPTR_    D S - - A A D M N N - - - - E I S S - - - V I S N L E A G K R - - - - - S F D E Q E A P P C T L V Q S M D L D C F W N -
pt014435_POPTR_    D T G L S T D V N T T T - - E I S S - - - V V S K Q E I G S H N E F Y E S L E D P L A G P I A - - - - - - - D Y M W D -
 
AT3G04060.1     L Y T S
pt023097_POPTR_    - Y - -
pt014435_POPTR_    - Y - -
 
0