fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044820 not found in 410aa AT5G18270.1 1st_not 0.447916666 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04060.1     MVEEGGVVVNQGG-----DQEVVDLPPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQA
gm044820_Glyma1 MMEE-PVVVNKGDYDHDHDQP-LDLPPGFRFHPTDEEIITCYLTEKVLNRAFSATAIGEA
                *:**  ****:*.     **  :***************** **.***:*  *:*:***:*

AT3G04060.1     DLNKNEPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNRATVSGYWKATGKDKEIFRGKG
gm044820_Glyma1 DFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIFKGKN
                *:** ******* ******::******************** **************:**.

AT3G04060.1     CLVGMKKTLVFYTGRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARDEWVVCRVFHKNAPS
gm044820_Glyma1 NLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLDGKFACYNLPKAAKDEWVVCKVFHKSSTT
                 *********** ***************:*****:: :****:*:******:****.:.:

AT3G04060.1     TTITTTKQLS-------RIDSLDNIDHLLDFSSLPPLIDPGF------------------
gm044820_Glyma1 TTDVNKRVLPIINPGLLRMNSSNGEDLLFDFSSLPPLVDPLFDQTSNKHIDNDFKGTNNT
                ** ...: *.       *::* :. * *:********:** *                  

AT3G04060.1     -----------LGQPGPSFSGARQQHDL--KPVLHHPTTAPVDNTYLPTQALNFPYHSVH
gm044820_Glyma1 PSSSSAKLPSSSGYYLPNFNNNNNQQMLMMKPEEHKIYEIPINN-YASTSQVDF------
                            *   *.*.. .:*: *  **  *:    *::* * .*. ::*      

AT3G04060.1     NSGSDFGYGAGSGNNN----KGMIKLEHS-------------------------------
gm044820_Glyma1 -TTTNNPMGISTSNNNILLSQPQIRTQNSTSVPFNMFQDCYNHTHQGKQCKMEQFSIDST
                 : ::   * .:.***    :  *: ::*                               

AT3G04060.1     ----LVSVSQETGLSSDVNTTATPEISSYPMMMNPAM----MDGSKSACDGLDDL-IFWE
gm044820_Glyma1 KKQPVVSASQDTCLSNDTSSVVSKQDNN--MGRNKALYEDNFEGPSSVATTLSDLECLWD
                    :**.**:* **.*..:..: : ..  *  * *:    ::*..*..  *.**  :*:

AT3G04060.1     DLYTS
gm044820_Glyma1 DY---
                *
BoxShade v3.31 C (beta, 970507) Output
AT3G04060.1     M V E E G G V V V N Q G G - - - - - D Q E V V D L P P G F R F H P T D E E I I T H Y L K E K V F N I R F T A A A I G Q A
gm044820_Glyma1    M M E E - P V V V N K G D Y D H D H D Q P - L D L P P G F R F H P T D E E I I T C Y L T E K V L N R A F S A T A I G E A
 
AT3G04060.1     D L N K N E P W D L P K I A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T V S G Y W K A T G K D K E I F R G K G
gm044820_Glyma1    D F N K C E P W D L P K K A K M G E K D W Y F F C Q R D R K Y P T G M R T N R A T Q S G Y W K A T G K D K E I F K G K N
 
AT3G04060.1     C L V G M K K T L V F Y T G R A P K G E K T N W V M H E Y R L D G K Y S Y H N L P K T A R D E W V V C R V F H K N A P S
gm044820_Glyma1    N L V G M K K T L V F Y R G R A P K G E K T N W V M H E F R L D G K F A C Y N L P K A A K D E W V V C K V F H K S S T T
 
AT3G04060.1     T T I T T T K Q L S - - - - - - - R I D S L D N I D H L L D F S S L P P L I D P G F - - - - - - - - - - - - - - - - - -
gm044820_Glyma1    T T D V N K R V L P I I N P G L L R M N S S N G E D L L F D F S S L P P L V D P L F D Q T S N K H I D N D F K G T N N T
 
AT3G04060.1     - - - - - - - - - - - L G Q P G P S F S G A R Q Q H D L - - K P V L H H P T T A P V D N T Y L P T Q A L N F P Y H S V H
gm044820_Glyma1    P S S S S A K L P S S S G Y Y L P N F N N N N N Q Q M L M M K P E E H K I Y E I P I N N - Y A S T S Q V D F - - - - - -
 
AT3G04060.1     N S G S D F G Y G A G S G N N N - - - - K G M I K L E H S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm044820_Glyma1    - T T T N N P M G I S T S N N N I L L S Q P Q I R T Q N S T S V P F N M F Q D C Y N H T H Q G K Q C K M E Q F S I D S T
 
AT3G04060.1     - - - - L V S V S Q E T G L S S D V N T T A T P E I S S Y P M M M N P A M - - - - M D G S K S A C D G L D D L - I F W E
gm044820_Glyma1    K K Q P V V S A S Q D T C L S N D T S S V V S K Q D N N - - M G R N K A L Y E D N F E G P S S V A T T L S D L E C L W D
 
AT3G04060.1     D L Y T S
gm044820_Glyma1    D Y - - -
 
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