fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013083 not found in 367aa AT3G04070.2 not_not 0.462162162 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04070.1     MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAP
pt013083_POPTR_ --MKNQQSSLPPGFRFHPTDEELILHYLRKKVASTPFPVSIIADVDIYKFDPWDLPAKAA
                   *: :*************************:*:*.*:********** *********.

AT3G04070.1     FGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIA----VPNG---EGFHENIG
pt013083_POPTR_ LGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIMASTITPGGVIIQG-QENVG
                :*************************************:*     .*.*   :* :**:*

AT3G04070.1     IKKALVFYRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSM
pt013083_POPTR_ VKKALVFYKGKPPKGVKTDWIMHEYRLADT-------SSYS----YNKPMKPRDS---SM
                :*******:*********:**********:       ** *     *: :  *:*   **

AT3G04070.1     RLDDWVLCRIYKKSHASLSSPDVALVTSNQEHEENDNEPFVDRGTFLPNLQ----NDQPL
pt013083_POPTR_ RLDDWVLCRIYKKAHA-LTSCARAEMSSEHEQEE-EEEHFVPENP-LPSLKGPISNKSAL
                *************:** *:*   * ::*::*:** ::* ** ... **.*:    *...*

AT3G04070.1     KRQKSSCSFSNLLDATDLTFLANFLNETPENRSESDFSFMIGN----------FSNPDIY
pt013083_POPTR_ MSQK-SCSFSNLLDAMDYSLLSSLLADTQFNPTGFESNPALNSTASQLDQPPFFSNSNIA
                  ** ********** * ::*:.:* :*  * :  : .  :..          ***.:* 

AT3G04070.1     GNH----YLDQKLPQLSSPTSETSGIGSKRERVDFAEETINASKKMMNTYSYNNS-----
pt013083_POPTR_ GGGGGGCFL-QKLPQLSASAPNNVDNKLKRQLSHIDEDMLHPSKKFMNSCSFTNTNNIST
                *.     :* *******:.:.:. .   **:  .: *: ::.***:**: *:.*:     

AT3G04070.1     -IDQMDHSMMQQPSFLNQELMMSSHLQYQG
pt013083_POPTR_ QTDNGQYNFLSQP-FLNQQFLLSPHLQFQG
                  *: ::.::.** ****::::*.***:**
BoxShade v3.31 C (beta, 970507) Output
AT3G04070.1     M I S K D P R S S L P P G F R F H P T D E E L I L H Y L R K K V S S S P V P L S I I A D V D I Y K S D P W D L P A K A P
pt013083_POPTR_    - - M K N Q Q S S L P P G F R F H P T D E E L I L H Y L R K K V A S T P F P V S I I A D V D I Y K F D P W D L P A K A A
 
AT3G04070.1     F G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K L I A - - - - V P N G - - - E G F H E N I G
pt013083_POPTR_    L G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K V I M A S T I T P G G V I I Q G - Q E N V G
 
AT3G04070.1     I K K A L V F Y R G K P P K G V K T N W I M H E Y R L A D S L S P K R I N S S R S G G S E V N N N F G D R N S K E Y S M
pt013083_POPTR_    V K K A L V F Y K G K P P K G V K T D W I M H E Y R L A D T - - - - - - - S S Y S - - - - Y N K P M K P R D S - - - S M
 
AT3G04070.1     R L D D W V L C R I Y K K S H A S L S S P D V A L V T S N Q E H E E N D N E P F V D R G T F L P N L Q - - - - N D Q P L
pt013083_POPTR_    R L D D W V L C R I Y K K A H A - L T S C A R A E M S S E H E Q E E - E E E H F V P E N P - L P S L K G P I S N K S A L
 
AT3G04070.1     K R Q K S S C S F S N L L D A T D L T F L A N F L N E T P E N R S E S D F S F M I G N - - - - - - - - - - F S N P D I Y
pt013083_POPTR_    M S Q K - S C S F S N L L D A M D Y S L L S S L L A D T Q F N P T G F E S N P A L N S T A S Q L D Q P P F F S N S N I A
 
AT3G04070.1     G N H - - - - Y L D Q K L P Q L S S P T S E T S G I G S K R E R V D F A E E T I N A S K K M M N T Y S Y N N S - - - - -
pt013083_POPTR_    G G G G G G C F L - Q K L P Q L S A S A P N N V D N K L K R Q L S H I D E D M L H P S K K F M N S C S F T N T N N I S T
 
AT3G04070.1     - I D Q M D H S M M Q Q P S F L N Q E L M M S S H L Q Y Q G
pt013083_POPTR_    Q T D N G Q Y N F L S Q P - F L N Q Q F L L S P H L Q F Q G
 
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