fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043854 not found in 353aa AT3G04070.1 1st_1st 0.444594594 Ia
Pt014473 not found in 368aa AT3G04070.1 1st_1st 0.482432432 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04070.1     MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAP
gm043854_Glyma1 --MGSPESNLPPGFRFHPTDEELILHYLSKKVASIPLTVSIIAEVDIYKLDPWDLPAKAT
pt014473_POPTR_ --MKNPQSSLPPGFRFHPTDEELILHYLKKKLASTPFPVSIIADVDIYKFDPWDLPAKAS
                    .*.*.******************* **::* *..:****:***** *********.

AT3G04070.1     FGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGE-----GFHENIGIK
gm043854_Glyma1 FGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQG-----GAQESVGVK
pt014473_POPTR_ LGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIIMASTMAPGGVVGGQENIGVK
                :************************************* * ..        * :*.:*:*

AT3G04070.1     KALVFYRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRL
gm043854_Glyma1 KALVFYKGRPPKGVKTNWIMHEYRLVD-------------------NNKPIKLKDSSMRL
pt014473_POPTR_ KALVFYKGKPPKGVKTNWIMHEYRLADN-------------PACNNNKKSMKPKDSSMRL
                ******:*:****************.*                   *    : *: ****

AT3G04070.1     DDWVLCRIYKKS-HASLSSPDVALVTSNQEHEENDNEP---FVDRGTFLPNLQN------
gm043854_Glyma1 DDWVLCRIYKKSKHA-LTSTEASIGVGEVDQAEE-------HLFQETLLP-ISKSPAPPP
pt014473_POPTR_ DDWVLCRIYKKS-HA-LTSSPRALISSEHDQEEEEEEQQQQQFVQETLLP-ISN------
                ************ ** *:*.  ::  .: :: *:        . : *:** :.:      

AT3G04070.1     DQPLKRQKSSCSFSNLLDATDLTFLANFLNETPEN-----RSESDFSFMIGNFSNP----
gm043854_Glyma1 QNTLISQK-SVSFSNLLDAMDYSILSSFLSENHTNHPPGVGSSAGFNT--GNLDQ-----
pt014473_POPTR_ KNNLMSQK-SCSFSNLFDAMDYSMWSSFLADTPFN-PTGFESNPTLNSTATQLDQPFFSN
                .: *  ** * *****:** * :: :.** :.  *      *.. :.    ::.:     

AT3G04070.1     -------DIYGNHYLDQKLPQLSSPTSET--SGIGSKRERVDFAEETINASKKMM-NTYS
gm043854_Glyma1 QCSPINNNNPTNNYMFQKNPQLNPSVSNM-ENMMRPKRQVSNMDEETLYPSKKYLSSSCN
pt014473_POPTR_ SNSASNSNSTSSGSFLQKLPQLNTSMPNMQENKL--KRQLPHIDEDLLHPSKKFM-NSCS
                       :   .  : ** ***... .:   . :  **:  .: *: : .*** : .: .

AT3G04070.1     Y-----NNSIDQMDHSMMQQPSFLNQELMMSSHLQYQG
gm043854_Glyma1 FP-TNISNQYENPQWNYLMKQSLMNQRLMLGPHLQFQG
pt014473_POPTR_ FTNTNNNTQTDMGQYNFV-SQPFLDQQLLLSPHLQFLG
                :     ... :  : . : . .:::*.*::..***: *
BoxShade v3.31 C (beta, 970507) Output
AT3G04070.1     M I S K D P R S S L P P G F R F H P T D E E L I L H Y L R K K V S S S P V P L S I I A D V D I Y K S D P W D L P A K A P
gm043854_Glyma1    - - M G S P E S N L P P G F R F H P T D E E L I L H Y L S K K V A S I P L T V S I I A E V D I Y K L D P W D L P A K A T
pt014473_POPTR_    - - M K N P Q S S L P P G F R F H P T D E E L I L H Y L K K K L A S T P F P V S I I A D V D I Y K F D P W D L P A K A S
 
AT3G04070.1     F G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K L I A V P N G E - - - - - G F H E N I G I K
gm043854_Glyma1    F G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K T I V T S L Q G - - - - - G A Q E S V G V K
pt014473_POPTR_    L G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K I I M A S T M A P G G V V G G Q E N I G V K
 
AT3G04070.1     K A L V F Y R G K P P K G V K T N W I M H E Y R L A D S L S P K R I N S S R S G G S E V N N N F G D R N S K E Y S M R L
gm043854_Glyma1    K A L V F Y K G R P P K G V K T N W I M H E Y R L V D - - - - - - - - - - - - - - - - - - - N N K P I K L K D S S M R L
pt014473_POPTR_    K A L V F Y K G K P P K G V K T N W I M H E Y R L A D N - - - - - - - - - - - - - P A C N N N K K S M K P K D S S M R L
 
AT3G04070.1     D D W V L C R I Y K K S - H A S L S S P D V A L V T S N Q E H E E N D N E P - - - F V D R G T F L P N L Q N - - - - - -
gm043854_Glyma1    D D W V L C R I Y K K S K H A - L T S T E A S I G V G E V D Q A E E - - - - - - - H L F Q E T L L P - I S K S P A P P P
pt014473_POPTR_    D D W V L C R I Y K K S - H A - L T S S P R A L I S S E H D Q E E E E E E Q Q Q Q Q F V Q E T L L P - I S N - - - - - -
 
AT3G04070.1     D Q P L K R Q K S S C S F S N L L D A T D L T F L A N F L N E T P E N - - - - - R S E S D F S F M I G N F S N P - - - -
gm043854_Glyma1    Q N T L I S Q K - S V S F S N L L D A M D Y S I L S S F L S E N H T N H P P G V G S S A G F N T - - G N L D Q - - - - -
pt014473_POPTR_    K N N L M S Q K - S C S F S N L F D A M D Y S M W S S F L A D T P F N - P T G F E S N P T L N S T A T Q L D Q P F F S N
 
AT3G04070.1     - - - - - - - D I Y G N H Y L D Q K L P Q L S S P T S E T - - S G I G S K R E R V D F A E E T I N A S K K M M - N T Y S
gm043854_Glyma1    Q C S P I N N N N P T N N Y M F Q K N P Q L N P S V S N M - E N M M R P K R Q V S N M D E E T L Y P S K K Y L S S S C N
pt014473_POPTR_    S N S A S N S N S T S S G S F L Q K L P Q L N T S M P N M Q E N K L - - K R Q L P H I D E D L L H P S K K F M - N S C S
 
AT3G04070.1     Y - - - - - N N S I D Q M D H S M M Q Q P S F L N Q E L M M S S H L Q Y Q G
gm043854_Glyma1    F P - T N I S N Q Y E N P Q W N Y L M K Q S L M N Q R L M L G P H L Q F Q G
pt014473_POPTR_    F T N T N N N T Q T D M G Q Y N F V - S Q P F L D Q Q L L L S P H L Q F L G
 
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