fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043854 not found in 353aa AT3G04070.1 1st_1st 0.444594594 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04070.1     MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAP
gm043854_Glyma1 --MGSPESNLPPGFRFHPTDEELILHYLSKKVASIPLTVSIIAEVDIYKLDPWDLPAKAT
                    .*.*.******************* ***:* *:.:****:***** *********.

AT3G04070.1     FGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVF
gm043854_Glyma1 FGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAQESVGVKKALVF
                ************************************** *...   * :*.:*:******

AT3G04070.1     YRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVL
gm043854_Glyma1 YKGRPPKGVKTNWIMHEYRLVDNNKPIKL-------------------KDSSMRLDDWVL
                *:*:****************.*. .* ::                   *: *********

AT3G04070.1     CRIYKKSHASLSSPDVAL----VTSNQEHEENDNEPFVDRGTFLPNLQNDQP-----LKR
gm043854_Glyma1 CRIYKKSKHALTSTEASIGVGEVDQAEEH--------LFQETLLPISKSPAPPPQNTLIS
                *******: :*:*.:.::    * . :**        : : *:**  :.  *     *  

AT3G04070.1     QKSSCSFSNLLDATDLTFLANFLNETPENRSE---SDFSFMIGNF---------SNPDIY
gm043854_Glyma1 QK-SVSFSNLLDAMDYSILSSFLSENHTNHPPGVGSSAGFNTGNLDQQCSPINNNNPT--
                ** * ******** * ::*:.**.*.  *:.    *. .*  **:         .**   

AT3G04070.1     GNHYLDQKLPQLSSPTSETSG-IGSKRERVDFAEETINASKKMMNTY---------SYNN
gm043854_Glyma1 -NNYMFQKNPQLNPSVSNMENMMRPKRQVSNMDEETLYPSKKYLSSSCNFPTNISNQYEN
                 *:*: ** ***....*: .. : .**:  :: ***: .*** :.:          .*:*

AT3G04070.1     SIDQMDHSMMQQPSFLNQELMMSSHLQYQG
gm043854_Glyma1 P--QWNYLMKQ--SLMNQRLMLGPHLQFQG
                .  * :: * *  *::**.**:..***:**
BoxShade v3.31 C (beta, 970507) Output
AT3G04070.1     M I S K D P R S S L P P G F R F H P T D E E L I L H Y L R K K V S S S P V P L S I I A D V D I Y K S D P W D L P A K A P
gm043854_Glyma1    - - M G S P E S N L P P G F R F H P T D E E L I L H Y L S K K V A S I P L T V S I I A E V D I Y K L D P W D L P A K A T
 
AT3G04070.1     F G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K L I A V P N G E G F H E N I G I K K A L V F
gm043854_Glyma1    F G E K E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K T I V T S L Q G G A Q E S V G V K K A L V F
 
AT3G04070.1     Y R G K P P K G V K T N W I M H E Y R L A D S L S P K R I N S S R S G G S E V N N N F G D R N S K E Y S M R L D D W V L
gm043854_Glyma1    Y K G R P P K G V K T N W I M H E Y R L V D N N K P I K L - - - - - - - - - - - - - - - - - - - K D S S M R L D D W V L
 
AT3G04070.1     C R I Y K K S H A S L S S P D V A L - - - - V T S N Q E H E E N D N E P F V D R G T F L P N L Q N D Q P - - - - - L K R
gm043854_Glyma1    C R I Y K K S K H A L T S T E A S I G V G E V D Q A E E H - - - - - - - - L F Q E T L L P I S K S P A P P P Q N T L I S
 
AT3G04070.1     Q K S S C S F S N L L D A T D L T F L A N F L N E T P E N R S E - - - S D F S F M I G N F - - - - - - - - - S N P D I Y
gm043854_Glyma1    Q K - S V S F S N L L D A M D Y S I L S S F L S E N H T N H P P G V G S S A G F N T G N L D Q Q C S P I N N N N P T - -
 
AT3G04070.1     G N H Y L D Q K L P Q L S S P T S E T S G - I G S K R E R V D F A E E T I N A S K K M M N T Y - - - - - - - - - S Y N N
gm043854_Glyma1    - N N Y M F Q K N P Q L N P S V S N M E N M M R P K R Q V S N M D E E T L Y P S K K Y L S S S C N F P T N I S N Q Y E N
 
AT3G04070.1     S I D Q M D H S M M Q Q P S F L N Q E L M M S S H L Q Y Q G
gm043854_Glyma1    P - - Q W N Y L M K Q - - S L M N Q R L M L G P H L Q F Q G
 
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