fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb019506 not found in 199aa AT3G04570.1 1st_1st 0.518950437 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04570.1     MANPWWTGQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVDNNNNDDDR
Sb019506_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G04570.1     DNLSGDDHEPREGAVEAPTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIASGTDV
Sb019506_Sorbi1 ------------------------------NKPNPPIFVTRDSPNALRSHVMEVAGGADV
                                              ***:*************:*****:*.*:**

AT3G04570.1     IETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQGRFEILSLTG
Sb019506_Sorbi1 ADAIAQFSRRRQRGVCVLSGAGTVANVALRQPS------AP--TAVVALHGRFEILSLTG
                 :::* *:******:*:*** ******:*****      **  :**:**:**********

AT3G04570.1     SFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPVMLIAATFSNATYERLPLEEE
Sb019506_Sorbi1 TFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGTLIAAGPVMVIASTFANATYERLPLEEE
                :**************:****************.*:******:**:**:************

AT3G04570.1     EAAERGGGGGSGGVVPGQLGGGGSPLSSGAGGGDGNQGLPVYNMPGNLVSNGGSGGGGQM
Sb019506_Sorbi1 EE----------GPAPPMAPGGADPLMGPGHGIADPSALPMFNLP---------PGNGQL
                *           * .*    **..** . . *  . ..**::*:*          *.**:

AT3G04570.1     SGQEAY-GWAQARSGF
Sb019506_Sorbi1 GGGDGFPTWAHPRPPY
                .* :.:  **:.*. :
BoxShade v3.31 C (beta, 970507) Output
AT3G04570.1     M A N P W W T G Q V N L S G L E T T P P G S S Q L K K P D L H I S M N M A M D S G H N N H H H H Q E V D N N N N D D D R
Sb019506_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G04570.1     D N L S G D D H E P R E G A V E A P T R R P R G R P A G S K N K P K P P I F V T R D S P N A L K S H V M E I A S G T D V
Sb019506_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N K P N P P I F V T R D S P N A L R S H V M E V A G G A D V
 
AT3G04570.1     I E T L A T F A R R R Q R G I C I L S G N G T V A N V T L R Q P S T A A V A A A P G G A A V L A L Q G R F E I L S L T G
Sb019506_Sorbi1    A D A I A Q F S R R R Q R G V C V L S G A G T V A N V A L R Q P S - - - - - - A P - - T A V V A L H G R F E I L S L T G
 
AT3G04570.1     S F L P G P A P P G S T G L T I Y L A G G Q G Q V V G G S V V G P L M A A G P V M L I A A T F S N A T Y E R L P L E E E
Sb019506_Sorbi1    T F L P G P A P P G S T G L T V Y L A G G Q G Q V V G G S V V G T L I A A G P V M V I A S T F A N A T Y E R L P L E E E
 
AT3G04570.1     E A A E R G G G G G S G G V V P G Q L G G G G S P L S S G A G G G D G N Q G L P V Y N M P G N L V S N G G S G G G G Q M
Sb019506_Sorbi1    E E - - - - - - - - - - G P A P P M A P G G A D P L M G P G H G I A D P S A L P M F N L P - - - - - - - - - P G N G Q L
 
AT3G04570.1     S G Q E A Y - G W A Q A R S G F
Sb019506_Sorbi1    G G G D G F P T W A H P R P P Y
 
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