fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp033407 not found in 311aa AT4G17800.1 1st_not 0.422740524 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04570.1     ---MANPW----------WT-----------GQVNLSGLETTPPGSSQLKKPDLHISMNM
pp033407_Pp1s48 MTQIDAPWGIVRARYEKPWEDKHKQAAPENFGHVCMAGVEG---GTEAGSRPSPQ-----
                   :  **          *            *:* ::*:*    *:.  .:*. :     

AT3G04570.1     AMDSGHNNHHHHQEVDNNNNDDDRD---------NLSGDDHEPREGAVEAPTRRPRGRPA
pp033407_Pp1s48 ---------------GGNSSDEDQSGSSVPGRPRKRSKGKSRPPPGPGE-PSRKPRGRPP
                               ..*..*:*:.         : * .. .*  *. * *:*:*****.

AT3G04570.1     GSKNKPKPPIFVTRDSPNALKSHVMEIASGTDVIETLATFARRRQRGICILSGNGTVANV
pp033407_Pp1s48 GSKNKPKPPVIITRENGNAMRPHVLEVASGHDVWESVTDFARRRQRGVCVMGGSGTVTNV
                *********:::**:. **::.**:*:*** ** *::: ********:*::.*.***:**

AT3G04570.1     TLRQPSTAAVAAAPGGAAVLALQGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVG
pp033407_Pp1s48 TLRQPTT------PG--ATVTIHGRFEIISLSGSYLPPPAPSPPTGLTISFAGASGQVLG
                *****:*      **  *.::::*****:**:**:** ***. .***** :**..***:*

AT3G04570.1     GSVVGPLMAAGPVMLIAATFSNATYERLPLEEEEAAERGGGGGSGGVVPGQLGGGGSPLS
pp033407_Pp1s48 GCVAGALTAASPVLVIATSFTGATYDRLPLADDE----------------------PPIM
                *.*.*.* **.**::**::*:.***:**** ::*                      .*: 

AT3G04570.1     --SGAGGGDGNQG--LPVYNMPG-------NLVSNGGSGGGGQMSGQEAYG-WAQARSGF
pp033407_Pp1s48 QVTTASGAQAMQAPDLSSYN-PSTALQNLYNIVPQTNPNLASQQAAQDVLNQWASG-SGH
                  : *.*.:. *.  *. ** *.       *:*.: ... ..* :.*:. . **.. **.

AT3G04570.1     -------
pp033407_Pp1s48 TQRPQQY
BoxShade v3.31 C (beta, 970507) Output
AT3G04570.1     - - - M A N P W - - - - - - - - - - W T - - - - - - - - - - - G Q V N L S G L E T T P P G S S Q L K K P D L H I S M N M
pp033407_Pp1s48    M T Q I D A P W G I V R A R Y E K P W E D K H K Q A A P E N F G H V C M A G V E G - - - G T E A G S R P S P Q - - - - -
 
AT3G04570.1     A M D S G H N N H H H H Q E V D N N N N D D D R D - - - - - - - - - N L S G D D H E P R E G A V E A P T R R P R G R P A
pp033407_Pp1s48    - - - - - - - - - - - - - - - G G N S S D E D Q S G S S V P G R P R K R S K G K S R P P P G P G E - P S R K P R G R P P
 
AT3G04570.1     G S K N K P K P P I F V T R D S P N A L K S H V M E I A S G T D V I E T L A T F A R R R Q R G I C I L S G N G T V A N V
pp033407_Pp1s48    G S K N K P K P P V I I T R E N G N A M R P H V L E V A S G H D V W E S V T D F A R R R Q R G V C V M G G S G T V T N V
 
AT3G04570.1     T L R Q P S T A A V A A A P G G A A V L A L Q G R F E I L S L T G S F L P G P A P P G S T G L T I Y L A G G Q G Q V V G
pp033407_Pp1s48    T L R Q P T T - - - - - - P G - - A T V T I H G R F E I I S L S G S Y L P P P A P S P P T G L T I S F A G A S G Q V L G
 
AT3G04570.1     G S V V G P L M A A G P V M L I A A T F S N A T Y E R L P L E E E E A A E R G G G G G S G G V V P G Q L G G G G S P L S
pp033407_Pp1s48    G C V A G A L T A A S P V L V I A T S F T G A T Y D R L P L A D D E - - - - - - - - - - - - - - - - - - - - - - P P I M
 
AT3G04570.1     - - S G A G G G D G N Q G - - L P V Y N M P G - - - - - - - N L V S N G G S G G G G Q M S G Q E A Y G - W A Q A R S G F
pp033407_Pp1s48    Q V T T A S G A Q A M Q A P D L S S Y N - P S T A L Q N L Y N I V P Q T N P N L A S Q Q A A Q D V L N Q W A S G - S G H
 
AT3G04570.1     - - - - - - -
pp033407_Pp1s48    T Q R P Q Q Y
 
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