fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055277 not found in 295aa AT4G14465.1 1st_not 0.600583090 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04570.1     -----------MANPWWTGQVNLSGLE---TTPPGSSQLKKP-DLHISMNMAMDSGHNNH
gm055277_Glyma2 MGPSKHHMLATVANPWWTGQGGLSGVDHPGTHSPGLG--KRPSDLGISEN---SGGHN--
                           :******** .***::   * .** .  *:* ** ** *   ..***  

AT3G04570.1     HHHQEVDNNNNDDDRDNLSGDDHEPREGAVEAPTRRPRGRPAGSKNKPKPPIFVTRDSPN
gm055277_Glyma2 ---REEDEDNRD-----------EPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPN
                   :* *::*.*           **:*****. ********.******************

AT3G04570.1     ALKSHVMEIASGTDVIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAA
gm055277_Glyma2 TLRSHVMEVTGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPS------APG--A
                :*:*****::.*:** *::* ********:*:***.*:**********      ***  *

AT3G04570.1     VLALQGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPVMLIAA
gm055277_Glyma2 VVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLTGGQGQIVGGSVVGSLVAAGPVMVIAA
                *:**:**********:**************:**:*****:*******.*:******:***

AT3G04570.1     TFSNATYERLPLEEEEAAERGGGGGSGGVVPGQLGGGGS---PLSSGAGGGDGNQG----
gm055277_Glyma2 TFANATYERLPLDEDDEGPSSAAGAQ--------GGGSSPPPPLGIGSSGGGQLQGGMPD
                **:*********:*:: .  ...*..        ***.*   **. *:.**.  **    

AT3G04570.1     ---LPVYNMPGNLVSNGGSGGGGQMSGQEAYGWAQARSGF
gm055277_Glyma2 PSSMPLYNLPPN-------GGVGQV-GHEALAWAHGRAPF
                   :*:**:* *       ** **: *:** .**:.*: *
BoxShade v3.31 C (beta, 970507) Output
AT3G04570.1     - - - - - - - - - - - M A N P W W T G Q V N L S G L E - - - T T P P G S S Q L K K P - D L H I S M N M A M D S G H N N H
gm055277_Glyma2    M G P S K H H M L A T V A N P W W T G Q G G L S G V D H P G T H S P G L G - - K R P S D L G I S E N - - - S G G H N - -
 
AT3G04570.1     H H H Q E V D N N N N D D D R D N L S G D D H E P R E G A V E A P T R R P R G R P A G S K N K P K P P I F V T R D S P N
gm055277_Glyma2    - - - R E E D E D N R D - - - - - - - - - - - E P K E G A V E V G T R R P R G R P P G S K N K P K P P I F V T R D S P N
 
AT3G04570.1     A L K S H V M E I A S G T D V I E T L A T F A R R R Q R G I C I L S G N G T V A N V T L R Q P S T A A V A A A P G G A A
gm055277_Glyma2    T L R S H V M E V T G G A D V A E S V A Q F A R R R Q R G V C V L S G S G S V A N V T L R Q P S - - - - - - A P G - - A
 
AT3G04570.1     V L A L Q G R F E I L S L T G S F L P G P A P P G S T G L T I Y L A G G Q G Q V V G G S V V G P L M A A G P V M L I A A
gm055277_Glyma2    V V A L H G R F E I L S L T G T F L P G P A P P G S T G L T V Y L T G G Q G Q I V G G S V V G S L V A A G P V M V I A A
 
AT3G04570.1     T F S N A T Y E R L P L E E E E A A E R G G G G G S G G V V P G Q L G G G G S - - - P L S S G A G G G D G N Q G - - - -
gm055277_Glyma2    T F A N A T Y E R L P L D E D D E G P S S A A G A Q - - - - - - - - G G G S S P P P P L G I G S S G G G Q L Q G G M P D
 
AT3G04570.1     - - - L P V Y N M P G N L V S N G G S G G G G Q M S G Q E A Y G W A Q A R S G F
gm055277_Glyma2    P S S M P L Y N L P P N - - - - - - - G G V G Q V - G H E A L A W A H G R A P F
 
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