fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04590.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053257 not found in 361aa AT3G04590.2 1st_1st 0.412878787 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04590.2     MDPNESH-----HHHQQQQLHHLHQQQQQQQQQQRLTSPYFHHQLQHHHHLPTTVATTAS
gm053257_Glyma1 MEPIDNHLTSFFHHHQQQQQHHQHQ----------------------HQHPPPPPPTTAS
                *:* :.*     ******* ** **                      *:* *.. .****

AT3G04590.2     TGNAVPSSNNGLFPPQPQPQHQPNDGSSSLAVYPHSVPSSAVTAPMEPVKRKRGRPRKYV
gm053257_Glyma1 -----PT--NGLLPNA--------DGSHML--YPHSV-ASAVSSQLEPAKRKRGRPRKYG
                     *:  ***:*          ***  *  ***** :***:: :**.********** 

AT3G04590.2     TPEQALAAKKLASSASSSSAKQRRELAAVTGGTVSTNSGSSKKSQLGSVGKTGQCFTPHI
gm053257_Glyma1 TPEQALAAKKAATTSSQSFSADKKPHSPTFP---SSSFTSSKKSLSFALGNAGQGFTPHV
                ********** *:::*.* : :::  :..     *:.  *****   ::*::** ****:

AT3G04590.2     VNIAPGEDVVQKIMMFANQSKHELCVLSASGTISNASLRQPAPSGGNLPYEGQYEILSLS
gm053257_Glyma1 ISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGSITYEGRFEIISLT
                :.:*.**** ****:* :**::*:*:*****:**********.***.:.***::**:**:

AT3G04590.2     GSYIRTEQGGKSGGLSVSLSASDGQIIGGAIGSHLTAAGPVQVILGTFQLDRKKDAAGSG
gm053257_Glyma1 GSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKD-NGAG
                ***:*.* * ::*****.** :*******.:*. *.********:*** :*.***  *:*

AT3G04590.2     GKGDASNSGSRLTSPVSSGQLLGMGFPPGMESTGRNPMRGNDEQHDHHHHQAGLGGPHHF
gm053257_Glyma1 LKGDA--SASKLPSPVSE-PVSSLGFRQSVDSSSGNPIRGNDE------HQAMDGS--HF
                 ****  *.*:*.****.  : .:**  .::*:. **:*****      ***  *.  **

AT3G04590.2     MMQAPQGIHMTHSRPSEWRGGGNSGHDGRGGGGYDLSGRIG---HESSENGDYEQQIPD
gm053257_Glyma1 MIQQ-LGLHGTPPRSTDW-GRPDSRNTGFELTGFLSAGRTGHGAHQSPENGGYD-QIPD
                *:*   *:* * .*.::* *  :* : *    *:  :** *   *:*.***.*: ****
BoxShade v3.31 C (beta, 970507) Output
AT3G04590.2     M D P N E S H - - - - - H H H Q Q Q Q L H H L H Q Q Q Q Q Q Q Q Q Q R L T S P Y F H H Q L Q H H H H L P T T V A T T A S
gm053257_Glyma1    M E P I D N H L T S F F H H H Q Q Q Q Q H H Q H Q - - - - - - - - - - - - - - - - - - - - - - H Q H P P P P P P T T A S
 
AT3G04590.2     T G N A V P S S N N G L F P P Q P Q P Q H Q P N D G S S S L A V Y P H S V P S S A V T A P M E P V K R K R G R P R K Y V
gm053257_Glyma1    - - - - - P T - - N G L L P N A - - - - - - - - D G S H M L - - Y P H S V - A S A V S S Q L E P A K R K R G R P R K Y G
 
AT3G04590.2     T P E Q A L A A K K L A S S A S S S S A K Q R R E L A A V T G G T V S T N S G S S K K S Q L G S V G K T G Q C F T P H I
gm053257_Glyma1    T P E Q A L A A K K A A T T S S Q S F S A D K K P H S P T F P - - - S S S F T S S K K S L S F A L G N A G Q G F T P H V
 
AT3G04590.2     V N I A P G E D V V Q K I M M F A N Q S K H E L C V L S A S G T I S N A S L R Q P A P S G G N L P Y E G Q Y E I L S L S
gm053257_Glyma1    I S V A A G E D V G Q K I M L F M Q Q S R R E M C I L S A S G S I S N A S L R Q P A T S G G S I T Y E G R F E I I S L T
 
AT3G04590.2     G S Y I R T E Q G G K S G G L S V S L S A S D G Q I I G G A I G S H L T A A G P V Q V I L G T F Q L D R K K D A A G S G
gm053257_Glyma1    G S Y V R N E L G T R T G G L S V C L S N T D G Q I I G G G V G G P L K A A G P V Q V I V G T F F I D N K K D - N G A G
 
AT3G04590.2     G K G D A S N S G S R L T S P V S S G Q L L G M G F P P G M E S T G R N P M R G N D E Q H D H H H H Q A G L G G P H H F
gm053257_Glyma1    L K G D A - - S A S K L P S P V S E - P V S S L G F R Q S V D S S S G N P I R G N D E - - - - - - H Q A M D G S - - H F
 
AT3G04590.2     M M Q A P Q G I H M T H S R P S E W R G G G N S G H D G R G G G G Y D L S G R I G - - - H E S S E N G D Y E Q Q I P D
gm053257_Glyma1    M I Q Q - L G L H G T P P R S T D W - G R P D S R N T G F E L T G F L S A G R T G H G A H Q S P E N G G Y D - Q I P D
 
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