fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04730.1 NFEATELRLGLPGGNH at 7/236 in AT3G04730.1
FSETVDLKLNLSSTAM at 36/236 in AT3G04730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_1st 0.552132701 Ia
Pt015737 NFEETELRLGLPGGIG in 21/246 AT3G04730.1 1st_1st 0.699052132 Ia
FSETVDLKLNLSTKES in 52/246
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04730.1     -------------MINFEATELRLGLPGG---NHGGEMAGKNNGKRGFSETVDLKLNLSS
Sb031861_Sorbi1 ---------------------LDEHLPRHVADEHPVAVL-VLVGRHVLGAV---------
pt015737_POPTR_ MTSIMGAEPEKYSMINFEETELRLGLPGGIGNGNDGEVA-KSNGKRGFSETVDLKLNLST
                                     *   **      :   :     *:: :. .         

AT3G04730.1     TAMDSVSKVDLEN-MKEKVV---------KPPAKAQVVGWPPVRSFRKNVMSGQKPTTGD
Sb031861_Sorbi1 -----------EQIHQLALV---HAVHPLRPTA-----------------------SNGE
pt015737_POPTR_ K--ESGKGGDEEKVMKEKTVAPPASTDPAKPPAKAQVVGWPPIRSFRKNVMAVQK-----
                           *:  :   *         :*.*                           

AT3G04730.1     ATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFS
Sb031861_Sorbi1 GAEHLLERLGQ----------LLVALVHLEVHLAQVRRAVQAHLHERRTTASCRRRR---
pt015737_POPTR_ NSNDNGEKSGSSG--------TGVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFS
                 ::   :  *.            ** *::.:. *   * :: :*::     *    :   

AT3G04730.1     SFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDW----------MLVGDV---
Sb031861_Sorbi1 -------GLVGV--FAAAGALVG-LHGHDVLPERPDR---WPSHHLSLGGARLLGGVSLH
pt015737_POPTR_ SFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDW----------MLVGDV---
                       *  *:  *   . *:. *:* * :*   *:   *           *:*.*   

AT3G04730.1     ------------PWEMFVDS------------------------CKRIRIMKGSEAIGL-
Sb031861_Sorbi1 GGGGDDAALARGPLHLPADGGLLRGGHAAGVFLGGGNTVLMLVRLRRLQYGRGSRRLQLQ
pt015737_POPTR_ ------------PWEMFVDS------------------------CKRLRIMKGSEAIGL-
                            * .: .*.                         :*::  :**. : * 

AT3G04730.1     -----------------AP-----------------RALE--------------------
Sb031861_Sorbi1 LEVDGLCEAPLPGGDDRAPPFADHLSPAAGQAQTELRLLEPQVRRRHCCCRRHWPSSSPL
pt015737_POPTR_ -----------------AP-----------------RAVE--------------------
                                 **                 * :*                    

AT3G04730.1     -----------------------------KCKNRS--------------
Sb031861_Sorbi1 GSRLLLLPCFCFVCFALLASQDEEAGWLCKCKGGGFANARGLGRGATTT
pt015737_POPTR_ -----------------------------KCKNRI--------------
                                             ***.
BoxShade v3.31 C (beta, 970507) Output
AT3G04730.1     - - - - - - - - - - - - - M I N F E A T E L R L G L P G G - - - N H G G E M A G K N N G K R G F S E T V D L K L N L S S
Sb031861_Sorbi1    - - - - - - - - - - - - - - - - - - - - - L D E H L P R H V A D E H P V A V L - V L V G R H V L G A V - - - - - - - - -
pt015737_POPTR_    M T S I M G A E P E K Y S M I N F E E T E L R L G L P G G I G N G N D G E V A - K S N G K R G F S E T V D L K L N L S T
 
AT3G04730.1     T A M D S V S K V D L E N - M K E K V V - - - - - - - - - K P P A K A Q V V G W P P V R S F R K N V M S G Q K P T T G D
Sb031861_Sorbi1    - - - - - - - - - - - E Q I H Q L A L V - - - H A V H P L R P T A - - - - - - - - - - - - - - - - - - - - - - - S N G E
pt015737_POPTR_    K - - E S G K G G D E E K V M K E K T V A P P A S T D P A K P P A K A Q V V G W P P I R S F R K N V M A V Q K - - - - -
 
AT3G04730.1     A T E G N D K T S G S S G A T S S A S A C A T V A Y V K V S M D G A P Y L R K I D L K L Y K T Y Q D L S N A L S K M F S
Sb031861_Sorbi1    G A E H L L E R L G Q - - - - - - - - - - L L V A L V H L E V H L A Q V R R A V Q A H L H E R R T T A S C R R R R - - -
pt015737_POPTR_    N S N D N G E K S G S S G - - - - - - - - T G V A F V K V S M D G A P Y L R K V D L K L Y K S Y Q E L S D A L G K M F S
 
AT3G04730.1     S F T I G N Y G P Q G M K D F M N E S K L I D L L N G S D Y V P T Y E D K D G D W - - - - - - - - - - M L V G D V - - -
Sb031861_Sorbi1    - - - - - - - G L V G V - - F A A A G A L V G - L H G H D V L P E R P D R - - - W P S H H L S L G G A R L L G G V S L H
pt015737_POPTR_    S F T I G N C G S Q G M K D F M N E S K L I D L L N G S D Y V P T Y E D K D G D W - - - - - - - - - - M L V G D V - - -
 
AT3G04730.1     - - - - - - - - - - - - P W E M F V D S - - - - - - - - - - - - - - - - - - - - - - - - C K R I R I M K G S E A I G L -
Sb031861_Sorbi1    G G G G D D A A L A R G P L H L P A D G G L L R G G H A A G V F L G G G N T V L M L V R L R R L Q Y G R G S R R L Q L Q
pt015737_POPTR_    - - - - - - - - - - - - P W E M F V D S - - - - - - - - - - - - - - - - - - - - - - - - C K R L R I M K G S E A I G L -
 
AT3G04730.1     - - - - - - - - - - - - - - - - - A P - - - - - - - - - - - - - - - - - R A L E - - - - - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    L E V D G L C E A P L P G G D D R A P P F A D H L S P A A G Q A Q T E L R L L E P Q V R R R H C C C R R H W P S S S P L
pt015737_POPTR_    - - - - - - - - - - - - - - - - - A P - - - - - - - - - - - - - - - - - R A V E - - - - - - - - - - - - - - - - - - - -
 
AT3G04730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K C K N R S - - - - - - - - - - - - - -
Sb031861_Sorbi1    G S R L L L L P C F C F V C F A L L A S Q D E E A G W L C K C K G G G F A N A R G L G R G A T T T
pt015737_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K C K N R I - - - - - - - - - - - - - -
 
0