fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04730.1 NFEATELRLGLPGGNH at 7/236 in AT3G04730.1
FSETVDLKLNLSSTAM at 36/236 in AT3G04730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041779 AFEATELRLGLPGGGG in 11/277 AT3G23050.1 1st_not 0.604265402 II
FAETIDLKLKLEPAAA in 44/277
Os014857 VDVGTELRLGLPGGGG in 11/236 AT3G04730.1 not_1st 0.495260663 II
FEETIDLKLKLPTAGM in 40/236
YNSYKDLSLALQKMFG in 157/236
Os014856 VDVGTELRLGLPGGGG in 11/236 AT3G04730.1 not_1st 0.495260663 II
FEETIDLKLKLPTAGM in 40/236
YNSYKDLSLALQKMFG in 157/236
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04730.1     ----MINFEATELRLGLPGGNHGGEMAG----KNNGKRGFSETVDLKLNLSSTAM-----
Os041779_Os12t0 MA-ADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDD
Os014856_Os03t0 MAGADVDV-GTELRLGLPGGGGGAAEAA----AKAAKRGFEETIDLKLKLPTAGM-----
Os014857_Os03t0 MAGADVDV-GTELRLGLPGGGGGAAEAA----AKAAKRGFEETIDLKLKLPTAGM-----
                     : . .**********. ..  *.     . .**** **:****:* .:.      

AT3G04730.1     ---------DSVSKVDLENMKEKVVKPPA-----------------------------KA
Os041779_Os12t0 DDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKA
Os014856_Os03t0 ---EEAAA--------------GKAEAPAAEKA----KRPAEA----AAADAEKPPAPKA
Os014857_Os03t0 ---EEAAA--------------GKAEAPAAEKA----KRPAEA----AAADAEKPPAPKA
                                        ...**                             **

AT3G04730.1     QVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAP
Os041779_Os12t0 QVVGWPPVRSYRKNILAVQADKGKDAADG--------GGDKSGAGAAAAAFVKVSMDGAP
Os014856_Os03t0 QAVGWPPVRSFRRNIMTVQSVKSKKEEEA-DKQQQQPAANASGSNSS--AFVKVSMDGAP
Os014857_Os03t0 QAVGWPPVRSFRRNIMTVQSVKSKKEEEA-DKQQQQPAANASGSNSS--AFVKVSMDGAP
                *.********:*:*::: *  .  .  :.        ..  *.: .:  *:*********

AT3G04730.1     YLRKIDLKLYKTYQDLSNALSKMFSSFT-IGNYGPQGMKDFMNESKLIDLLNGSDYVPTY
Os041779_Os12t0 YLRKVDLKMYKSYLELSKALEKMFSSFT-IGNCGSHGVNG-MNESKIADLLNGSEYVPTY
Os014856_Os03t0 YLRKVDLKMYNSYKDLSLALQKMFGTFTATGNN--------MNE------VNGSDAVTTY
Os014857_Os03t0 YLRKVDLKMYNSYKDLSLALQKMFGTFTATGNN--------MNE------VNGSDAVTTY
                ****:***:*::* :** **.***.:**  **         ***      :***: *.**

AT3G04730.1     EDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS
Os041779_Os12t0 EDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS
Os014856_Os03t0 EDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS
Os014857_Os03t0 EDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS
                ***************:***:****:*************** :* **:*
BoxShade v3.31 C (beta, 970507) Output
AT3G04730.1     - - - - M I N F E A T E L R L G L P G G N H G G E M A G - - - - K N N G K R G F S E T V D L K L N L S S T A M - - - - -
Os041779_Os12t0    M A - A D L A F E A T E L R L G L P G G G G D G D A A A A A A R S S S G K R G F A E T I D L K L K L E P A A A A V D D D
Os014856_Os03t0    M A G A D V D V - G T E L R L G L P G G G G G A A E A A - - - - A K A A K R G F E E T I D L K L K L P T A G M - - - - -
Os014857_Os03t0    M A G A D V D V - G T E L R L G L P G G G G G A A E A A - - - - A K A A K R G F E E T I D L K L K L P T A G M - - - - -
 
AT3G04730.1     - - - - - - - - - D S V S K V D L E N M K E K V V K P P A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K A
Os041779_Os12t0    D D K E E A A A D D R E K K V D I V G A D N D D A S P P A A A A A G G M K R S P S Q S S V V T A A A D P E K P R A P K A
Os014856_Os03t0    - - - E E A A A - - - - - - - - - - - - - - G K A E A P A A E K A - - - - K R P A E A - - - - A A A D A E K P P A P K A
Os014857_Os03t0    - - - E E A A A - - - - - - - - - - - - - - G K A E A P A A E K A - - - - K R P A E A - - - - A A A D A E K P P A P K A
 
AT3G04730.1     Q V V G W P P V R S F R K N V M S G Q K P T T G D A T E G N D K T S G S S G A T S S A S A C A T V A Y V K V S M D G A P
Os041779_Os12t0    Q V V G W P P V R S Y R K N I L A V Q A D K G K D A A D G - - - - - - - - G G D K S G A G A A A A A F V K V S M D G A P
Os014856_Os03t0    Q A V G W P P V R S F R R N I M T V Q S V K S K K E E E A - D K Q Q Q Q P A A N A S G S N S S - - A F V K V S M D G A P
Os014857_Os03t0    Q A V G W P P V R S F R R N I M T V Q S V K S K K E E E A - D K Q Q Q Q P A A N A S G S N S S - - A F V K V S M D G A P
 
AT3G04730.1     Y L R K I D L K L Y K T Y Q D L S N A L S K M F S S F T - I G N Y G P Q G M K D F M N E S K L I D L L N G S D Y V P T Y
Os041779_Os12t0    Y L R K V D L K M Y K S Y L E L S K A L E K M F S S F T - I G N C G S H G V N G - M N E S K I A D L L N G S E Y V P T Y
Os014856_Os03t0    Y L R K V D L K M Y N S Y K D L S L A L Q K M F G T F T A T G N N - - - - - - - - M N E - - - - - - V N G S D A V T T Y
Os014857_Os03t0    Y L R K V D L K M Y N S Y K D L S L A L Q K M F G T F T A T G N N - - - - - - - - M N E - - - - - - V N G S D A V T T Y
 
AT3G04730.1     E D K D G D W M L V G D V P W E M F V D S C K R I R I M K G S E A I G L A P R A L E K C K N R S
Os041779_Os12t0    E D K D G D W M L V G D V P W E M F V E S C K R L R I M K G S E A I G L A P R A M E K C K N R S
Os014856_Os03t0    E D K D G D W M L V G D V P W Q M F V E S C K R L R I M K G S E A I G L A P R A K D K Y K N K S
Os014857_Os03t0    E D K D G D W M L V G D V P W Q M F V E S C K R L R I M K G S E A I G L A P R A K D K Y K N K S
 
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