fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04730.1 NFEATELRLGLPGGNH at 7/236 in AT3G04730.1
FSETVDLKLNLSSTAM at 36/236 in AT3G04730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_1st 0.540284360 II
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_1st 0.507109004 II
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04730.1     ------------------------------------------MINFE---ATELRLGLPG
Sb020598_Sorbi1 -GGPRVRGDR--------------APARPARRQRRRGCRGGEEAGFRGDHRPQAEAGAAG
Sb020260_Sorbi1 RGG--AQGERDNDGRDRLASNQLLAPAEPK-----------PMAGADVDVGTELRLGLPG
                                                            .      .: . * .*

AT3G04730.1     GNHGGEMAG-----KNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE----------
Sb020598_Sorbi1 GAALGEGGGGWRWRRRRPRRG--PTV-----VASSSQHRRRRYGHEEVAEPEQRGHRRRA
Sb020260_Sorbi1 G--GAEAA-------KAAKRGFEDTIDLKLKLPTAGMEEAAAAKPEPAAE----------
                *   .* .       .  :**   *:     :.::. .       *   *          

AT3G04730.1     ----KVV-----------KPPA-KAQVVGWP-PVRSFRKNVMSGQKPTTGDATEGNDKTS
Sb020598_Sorbi1 AGPRKASRPQGTGGGLAARPVVPQEHP-GRPIPEKWRRRQGQRRQDVTGVREGEHGRRAV
Sb020260_Sorbi1 ----KAKRPAEAPAADAEKPPAPKAQAVGWP-PVRSYRRNVMTVQSVKSKKEEEPEKQQS
                    *.            :* . : :  * * * :  *::    *. .     *   :  

AT3G04730.1     GSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI-GNYG
Sb020598_Sorbi1 PAQGGPEDVRELPG------AVQGAPE----DVQLLH-HRQLRAA-----------G---
Sb020260_Sorbi1 AAANASGNSS-----AFVKVSMDGAPYLRKVDLKMYNSYKDLSIALKKMFSTFTTSGNN-
                 : ... .            :::***     *::: : :::*  *           *   

AT3G04730.1     PQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVD------------SC
Sb020598_Sorbi1 --------------------------DDERGDEAAGG--PSERLRRLLAHVRGQGRRLDA
Sb020260_Sorbi1 -------MNEGKLVDPVSGADVVTTYEDKDGDWMLVGDVPWEMFVE------------SC
                                          :*: **    *  * * :              ..

AT3G04730.1     KRIRIMKGSEAIGLAPRALEK------------------------CKNRS----------
Sb020598_Sorbi1 RRRRPLGDVRGVVQAPPDHERIGSRRPRTQGDGQVQQQLLSKAYYCGNASVSSRYQLTAT
Sb020260_Sorbi1 KRLRIMKSSEAIGLAPRTKDK------------------------CKNKS----------
                :* * : . ..:  **   ::                        * * *          

AT3G04730.1     --------------
Sb020598_Sorbi1 VDNVLLLLLLHSVS
Sb020260_Sorbi1 --------------
BoxShade v3.31 C (beta, 970507) Output
AT3G04730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I N F E - - - A T E L R L G L P G
Sb020598_Sorbi1    - G G P R V R G D R - - - - - - - - - - - - - - A P A R P A R R Q R R R G C R G G E E A G F R G D H R P Q A E A G A A G
Sb020260_Sorbi1    R G G - - A Q G E R D N D G R D R L A S N Q L L A P A E P K - - - - - - - - - - - P M A G A D V D V G T E L R L G L P G
 
AT3G04730.1     G N H G G E M A G - - - - - K N N G K R G F S E T V D L K L N L S S T A M D S V S K V D L E N M K E - - - - - - - - - -
Sb020598_Sorbi1    G A A L G E G G G G W R W R R R R P R R G - - P T V - - - - - V A S S S Q H R R R R Y G H E E V A E P E Q R G H R R R A
Sb020260_Sorbi1    G - - G A E A A - - - - - - - K A A K R G F E D T I D L K L K L P T A G M E E A A A A K P E P A A E - - - - - - - - - -
 
AT3G04730.1     - - - - K V V - - - - - - - - - - - K P P A - K A Q V V G W P - P V R S F R K N V M S G Q K P T T G D A T E G N D K T S
Sb020598_Sorbi1    A G P R K A S R P Q G T G G G L A A R P V V P Q E H P - G R P I P E K W R R R Q G Q R R Q D V T G V R E G E H G R R A V
Sb020260_Sorbi1    - - - - K A K R P A E A P A A D A E K P P A P K A Q A V G W P - P V R S Y R R N V M T V Q S V K S K K E E E P E K Q Q S
 
AT3G04730.1     G S S G A T S S A S A C A T V A Y V K V S M D G A P Y L R K I D L K L Y K T Y Q D L S N A L S K M F S S F T I - G N Y G
Sb020598_Sorbi1    P A Q G G P E D V R E L P G - - - - - - A V Q G A P E - - - - D V Q L L H - H R Q L R A A - - - - - - - - - - - G - - -
Sb020260_Sorbi1    A A A N A S G N S S - - - - - A F V K V S M D G A P Y L R K V D L K M Y N S Y K D L S I A L K K M F S T F T T S G N N -
 
AT3G04730.1     P Q G M K D F M N E S K L I D L L N G S D Y V P T Y E D K D G D W M L V G D V P W E M F V D - - - - - - - - - - - - S C
Sb020598_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - D D E R G D E A A G G - - P S E R L R R L L A H V R G Q G R R L D A
Sb020260_Sorbi1    - - - - - - - M N E G K L V D P V S G A D V V T T Y E D K D G D W M L V G D V P W E M F V E - - - - - - - - - - - - S C
 
AT3G04730.1     K R I R I M K G S E A I G L A P R A L E K - - - - - - - - - - - - - - - - - - - - - - - - C K N R S - - - - - - - - - -
Sb020598_Sorbi1    R R R R P L G D V R G V V Q A P P D H E R I G S R R P R T Q G D G Q V Q Q Q L L S K A Y Y C G N A S V S S R Y Q L T A T
Sb020260_Sorbi1    K R L R I M K S S E A I G L A P R T K D K - - - - - - - - - - - - - - - - - - - - - - - - C K N K S - - - - - - - - - -
 
AT3G04730.1     - - - - - - - - - - - - - -
Sb020598_Sorbi1    V D N V L L L L L L H S V S
Sb020260_Sorbi1    - - - - - - - - - - - - - -
 
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