fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04730.1 NFEATELRLGLPGGNH at 7/236 in AT3G04730.1
FSETVDLKLNLSSTAM at 36/236 in AT3G04730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_1st 0.552132701 Ia
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_1st 0.540284360 II
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_1st 0.507109004 II
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.462085308 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G04730.1     ------------------------------------------------------------
Sb020598_Sorbi1 ---GGPRVRGD-----------------------------RAPARP--------------
Sb031861_Sorbi1 LDEHLPRHVADEHPVAVLVLVGRHVLGAVEQIHQLALVHAVHPLRPTASNGEGAEHLLER
Sb020260_Sorbi1 --RGGAQGERDND--------GR---------DRLASNQLLAPAEPK-------------
Sb033829_Sorbi1 ----------------------------------------MAPPQEQ-------------
                                                                            

AT3G04730.1     -------MINFE---------------------ATELRLGLPGGN---------------
Sb020598_Sorbi1 --------------------------------ARRQRRRGCRGGEEA-----GFRG----
Sb031861_Sorbi1 LGQLLVALVHLEVHLAQVRRAVQAHLHERRTTASCRRRRGLVGVFAAAGALVGLHGHDVL
Sb020260_Sorbi1 ------PMAGADV------------------DVGTELRLGLPGG----------------
Sb033829_Sorbi1 ------DYIGLSPA----------------AAAATELRLGLPGTEE--------------
                                                   . * *  *                 

AT3G04730.1     --------------HGGEMAG----------KNNG---------KRGF------------
Sb020598_Sorbi1 ----DHRPQAEAGAAGGAALG----------EGGGGWRWRRRRPRRGP------------
Sb031861_Sorbi1 PERPDRWPSHHLSLGGARLLGGVSL------HGGGGDDAAL---ARGPLHLPADGGLLRG
Sb020260_Sorbi1 ---------------GAEAA------------KAA---------KRGF------------
Sb033829_Sorbi1 -------------ADGGEAAAGTPLTLELLPKGGA---------KRGF------------
                               *.                 .          **             

AT3G04730.1     -----------SETVD-LKLNLSSTAMDSVSKVDLENMKEKVV----------------K
Sb020598_Sorbi1 -----------TVVASSSQHRRRRYGHEEVAEPEQRGHRRRAAGPRKASRPQGTGGGLAA
Sb031861_Sorbi1 GHAAGVFLGGGNTVLMLVRLRRLQYGRGS-------------------------------
Sb020260_Sorbi1 -----------EDTID-LKLKLPTAGMEEAAAAKPEPAAEKAKRPAEAPAADA-----EK
Sb033829_Sorbi1 -----------TDAI----VRREAAARGKAPAEDEEVDKKKT-----------------Q
                             .      .    .  .                               

AT3G04730.1     PPA-KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKV
Sb020598_Sorbi1 RPVVPQEHPGRPIPEKWRRRQGQRRQDVTGVREGEHGRRAVPAQGGPEDV-----RELPG
Sb031861_Sorbi1 -----------------RRLQLQLEVDGL----------------------CE--APLPG
Sb020260_Sorbi1 PPAPKAQAVGWPPVRSYRRNVMTVQSVKSKKEEEPEKQQSAAANASGNSS-----AFVKV
Sb033829_Sorbi1 APAAKAQVVGWPPIRSYRKNTMAMNQPTLKTKDDGEAKQALVQDC----------LYVKV
                                 *:     .                                :  

AT3G04730.1     SMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI-GNYGPQGM--KDFMNE--SKLIDL
Sb020598_Sorbi1 AVQGAPE----DVQLLH-HRQLRAA-----------GDDE-RGDEAAGGPSERLRRLLAH
Sb031861_Sorbi1 GDDRAPPF----------ADHLSPAA----------GQAQ----------TE--LRLLEP
Sb020260_Sorbi1 SMDGAPYLRKVDLKMYNSYKDLSIALKKMFSTFTTSGNN----------MNE--GKLVDP
Sb033829_Sorbi1 SMDGAPYLRKVDLKMYKNYKDLSLALEKMFSCFTV-GHSESNGKSGREGLSD--CRLMDH
                . : **              .*  *           *.            .:   :*:  

AT3G04730.1     LNGSDYVPTYEDKD-------------GDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLA
Sb020598_Sorbi1 VRGQGRRLDARRRR-----------PLGDVRGVVQAPPDHERIGSRRPRTQGDGQVQQQL
Sb031861_Sorbi1 --------QVRRRHCCCRRHWPSSSPLGSRLLL--LPCFCFV--CFALLASQDEEAGWLC
Sb020260_Sorbi1 VSGADVVTTYEDKD-------------GDWMLVGDVPWEMFVESCKRLRIMKSSEAIGLA
Sb033829_Sorbi1 KNGTELVLTYKDKD-------------GDWMLVGDVPWRMFTGSCRRLRIMKGSDAVGLA
                          . :              *.   :   *       .       . :.    

AT3G04730.1     PRALEKCKNRS----------------------------
Sb020598_Sorbi1 LSKAYYCGNASVSSRYQL----TATVDNVLLLLLLHSVS
Sb031861_Sorbi1 -----KCKGGGFANARGLGRGATTT--------------
Sb020260_Sorbi1 PRTKDKCKNKS----------------------------
Sb033829_Sorbi1 PRVSDKSKNG-----------------------------
                      . .
BoxShade v3.31 C (beta, 970507) Output
AT3G04730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    - - - G G P R V R G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A P A R P - - - - - - - - - - - - - -
Sb031861_Sorbi1    L D E H L P R H V A D E H P V A V L V L V G R H V L G A V E Q I H Q L A L V H A V H P L R P T A S N G E G A E H L L E R
Sb020260_Sorbi1    - - R G G A Q G E R D N D - - - - - - - - G R - - - - - - - - - D R L A S N Q L L A P A E P K - - - - - - - - - - - - -
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A P P Q E Q - - - - - - - - - - - - -
 
AT3G04730.1     - - - - - - - M I N F E - - - - - - - - - - - - - - - - - - - - - A T E L R L G L P G G N - - - - - - - - - - - - - - -
Sb020598_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A R R Q R R R G C R G G E E A - - - - - G F R G - - - -
Sb031861_Sorbi1    L G Q L L V A L V H L E V H L A Q V R R A V Q A H L H E R R T T A S C R R R R G L V G V F A A A G A L V G L H G H D V L
Sb020260_Sorbi1    - - - - - - P M A G A D V - - - - - - - - - - - - - - - - - - D V G T E L R L G L P G G - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    - - - - - - D Y I G L S P A - - - - - - - - - - - - - - - - A A A A T E L R L G L P G T E E - - - - - - - - - - - - - -
 
AT3G04730.1     - - - - - - - - - - - - - - H G G E M A G - - - - - - - - - - K N N G - - - - - - - - - K R G F - - - - - - - - - - - -
Sb020598_Sorbi1    - - - - D H R P Q A E A G A A G G A A L G - - - - - - - - - - E G G G G W R W R R R R P R R G P - - - - - - - - - - - -
Sb031861_Sorbi1    P E R P D R W P S H H L S L G G A R L L G G V S L - - - - - - H G G G G D D A A L - - - A R G P L H L P A D G G L L R G
Sb020260_Sorbi1    - - - - - - - - - - - - - - - G A E A A - - - - - - - - - - - - K A A - - - - - - - - - K R G F - - - - - - - - - - - -
Sb033829_Sorbi1    - - - - - - - - - - - - - A D G G E A A A G T P L T L E L L P K G G A - - - - - - - - - K R G F - - - - - - - - - - - -
 
AT3G04730.1     - - - - - - - - - - - S E T V D - L K L N L S S T A M D S V S K V D L E N M K E K V V - - - - - - - - - - - - - - - - K
Sb020598_Sorbi1    - - - - - - - - - - - T V V A S S S Q H R R R R Y G H E E V A E P E Q R G H R R R A A G P R K A S R P Q G T G G G L A A
Sb031861_Sorbi1    G H A A G V F L G G G N T V L M L V R L R R L Q Y G R G S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020260_Sorbi1    - - - - - - - - - - - E D T I D - L K L K L P T A G M E E A A A A K P E P A A E K A K R P A E A P A A D A - - - - - E K
Sb033829_Sorbi1    - - - - - - - - - - - T D A I - - - - V R R E A A A R G K A P A E D E E V D K K K T - - - - - - - - - - - - - - - - - Q
 
AT3G04730.1     P P A - K A Q V V G W P P V R S F R K N V M S G Q K P T T G D A T E G N D K T S G S S G A T S S A S A C A T V A Y V K V
Sb020598_Sorbi1    R P V V P Q E H P G R P I P E K W R R R Q G Q R R Q D V T G V R E G E H G R R A V P A Q G G P E D V - - - - - R E L P G
Sb031861_Sorbi1    - - - - - - - - - - - - - - - - - R R L Q L Q L E V D G L - - - - - - - - - - - - - - - - - - - - - - C E - - A P L P G
Sb020260_Sorbi1    P P A P K A Q A V G W P P V R S Y R R N V M T V Q S V K S K K E E E P E K Q Q S A A A N A S G N S S - - - - - A F V K V
Sb033829_Sorbi1    A P A A K A Q V V G W P P I R S Y R K N T M A M N Q P T L K T K D D G E A K Q A L V Q D C - - - - - - - - - - L Y V K V
 
AT3G04730.1     S M D G A P Y L R K I D L K L Y K T Y Q D L S N A L S K M F S S F T I - G N Y G P Q G M - - K D F M N E - - S K L I D L
Sb020598_Sorbi1    A V Q G A P E - - - - D V Q L L H - H R Q L R A A - - - - - - - - - - - G D D E - R G D E A A G G P S E R L R R L L A H
Sb031861_Sorbi1    G D D R A P P F - - - - - - - - - - A D H L S P A A - - - - - - - - - - G Q A Q - - - - - - - - - - T E - - L R L L E P
Sb020260_Sorbi1    S M D G A P Y L R K V D L K M Y N S Y K D L S I A L K K M F S T F T T S G N N - - - - - - - - - - M N E - - G K L V D P
Sb033829_Sorbi1    S M D G A P Y L R K V D L K M Y K N Y K D L S L A L E K M F S C F T V - G H S E S N G K S G R E G L S D - - C R L M D H
 
AT3G04730.1     L N G S D Y V P T Y E D K D - - - - - - - - - - - - - G D W M L V G D V P W E M F V D S C K R I R I M K G S E A I G L A
Sb020598_Sorbi1    V R G Q G R R L D A R R R R - - - - - - - - - - - P L G D V R G V V Q A P P D H E R I G S R R P R T Q G D G Q V Q Q Q L
Sb031861_Sorbi1    - - - - - - - - Q V R R R H C C C R R H W P S S S P L G S R L L L - - L P C F C F V - - C F A L L A S Q D E E A G W L C
Sb020260_Sorbi1    V S G A D V V T T Y E D K D - - - - - - - - - - - - - G D W M L V G D V P W E M F V E S C K R L R I M K S S E A I G L A
Sb033829_Sorbi1    K N G T E L V L T Y K D K D - - - - - - - - - - - - - G D W M L V G D V P W R M F T G S C R R L R I M K G S D A V G L A
 
AT3G04730.1     P R A L E K C K N R S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    L S K A Y Y C G N A S V S S R Y Q L - - - - T A T V D N V L L L L L L H S V S
Sb031861_Sorbi1    - - - - - K C K G G G F A N A R G L G R G A T T T - - - - - - - - - - - - - -
Sb020260_Sorbi1    P R T K D K C K N K S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    P R V S D K S K N G - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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