Input
| Putative repression domain
|
|
AT3G04930.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm027827 |
not found in 372aa |
AT3G04930.1 |
1st_1st |
0.341158059 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G04930.1 MTSDHRDALFSLELESPDPDEGGVADGGESDTDEDLRDNDDVVMPGTNEAEAEDDDPEEE
gm027827_Glyma1 MESDLNDAVFP---------------------EEDLDDDDD------------DETPEDE
* ** .**:*. :*** *:** *: **:*
AT3G04930.1 DLNSPSTSSLPMVSTISATAVVSGTPTATSSTGAVTVALPAGSAVPVSVIPVDSDPKWHR
gm027827_Glyma1 EDYDDETEPPPFV-----LAVVAVAPPASTASETLDTTL-----IPISAVADSSLKPLH-
: . .*.. *:* ***: :*.*:::: :: .:* :*:*.:. .* *
AT3G04930.1 MTEIVHQRPPIDDSRRLFQRLWTDEDEIELLRGFLDYMTMHRGSSSHPPDTAPFYEQIKS
gm027827_Glyma1 -PELIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDY-TAQRGSSHH-SDTALFYDQIKS
.*::.:: .:***************** **:***** * :**** * .*** **:****
AT3G04930.1 KLQLDFNKNQLVEKLRRLKKKYRNVMSKISSGKEVFFKSPHDQSTFEISRKIWNQTGKII
gm027827_Glyma1 KLQLGFNKNQLVEKLRRLKKKYRNVVTKISSGKDVSFKSPHDKATFEISRRIWSNTAPIS
****.********************::******:* ******::******:**.:*. *
AT3G04930.1 GFEDNNVMDFEETNNHHNTTNGNYSTFNSPSSNPTLELDSENGIEKKLTMSSSSVSRKRS
gm027827_Glyma1 G----PVEDDDEINPNPN--------FGNSAKTP--------------------ISRKRS
* * * :* * : * *...:..* :*****
AT3G04930.1 RSRIGKIEEDNKPVITPSDGPIA-----SNVNLNEAAAVGIGGNLGGLIEETVKNCVSPV
gm027827_Glyma1 RPQ--KRELNDGSTLNRDNNCIGNNNNNSNSNNNNNENCNGRHNLQGLIEETVKSCVSPV
*.: * * :: ..:. .:. *. ** * *: . ** ********.*****
AT3G04930.1 IKEMMNGTTSMMMAAMGGGFPGLGGGGGGGGGHGFGSLSPMFTRP---FNFGFGVEGGGN
gm027827_Glyma1 LKELVCGTGGM---ELGRGF-GVGGGLGVGGGLALNSLQTQMTMPMTLLNLRIG------
:**:: ** .* :* ** *:*** * *** .:.**.. :* * :*: :*
AT3G04930.1 KAVADERWRKQQILELEVYSRRLELVQEQIRTTLNELKTMPSGI
gm027827_Glyma1 ETTMDEKWRKQQILELEVYSKRLELVQDEIKVALEELRS-AGGV
::. **:*************:******::*:.:*:**:: ..*:
BoxShade v3.31 C (beta, 970507) Output
AT3G04930.1 |
M |
T |
S |
D |
H |
R |
D |
A |
L |
F |
S |
L |
E |
L |
E |
S |
P |
D |
P |
D |
E |
G |
G |
V |
A |
D |
G |
G |
E |
S |
D |
T |
D |
E |
D |
L |
R |
D |
N |
D |
D |
V |
V |
M |
P |
G |
T |
N |
E |
A |
E |
A |
E |
D |
D |
D |
P |
E |
E |
E |
gm027827_Glyma1 |
M |
E |
S |
D |
L |
N |
D |
A |
V |
F |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
E |
D |
L |
D |
D |
D |
D |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
E |
T |
P |
E |
D |
E |
|
AT3G04930.1 |
D |
L |
N |
S |
P |
S |
T |
S |
S |
L |
P |
M |
V |
S |
T |
I |
S |
A |
T |
A |
V |
V |
S |
G |
T |
P |
T |
A |
T |
S |
S |
T |
G |
A |
V |
T |
V |
A |
L |
P |
A |
G |
S |
A |
V |
P |
V |
S |
V |
I |
P |
V |
D |
S |
D |
P |
K |
W |
H |
R |
gm027827_Glyma1 |
E |
D |
Y |
D |
D |
E |
T |
E |
P |
P |
P |
F |
V |
- |
- |
- |
- |
- |
L |
A |
V |
V |
A |
V |
A |
P |
P |
A |
S |
T |
A |
S |
E |
T |
L |
D |
T |
T |
L |
- |
- |
- |
- |
- |
I |
P |
I |
S |
A |
V |
A |
D |
S |
S |
L |
K |
P |
L |
H |
- |
|
AT3G04930.1 |
M |
T |
E |
I |
V |
H |
Q |
R |
P |
P |
I |
D |
D |
S |
R |
R |
L |
F |
Q |
R |
L |
W |
T |
D |
E |
D |
E |
I |
E |
L |
L |
R |
G |
F |
L |
D |
Y |
M |
T |
M |
H |
R |
G |
S |
S |
S |
H |
P |
P |
D |
T |
A |
P |
F |
Y |
E |
Q |
I |
K |
S |
gm027827_Glyma1 |
- |
P |
E |
L |
I |
E |
E |
K |
K |
A |
L |
D |
D |
S |
R |
R |
L |
F |
Q |
R |
L |
W |
T |
D |
E |
D |
E |
I |
G |
L |
L |
Q |
G |
F |
L |
D |
Y |
- |
T |
A |
Q |
R |
G |
S |
S |
H |
H |
- |
S |
D |
T |
A |
L |
F |
Y |
D |
Q |
I |
K |
S |
|
AT3G04930.1 |
K |
L |
Q |
L |
D |
F |
N |
K |
N |
Q |
L |
V |
E |
K |
L |
R |
R |
L |
K |
K |
K |
Y |
R |
N |
V |
M |
S |
K |
I |
S |
S |
G |
K |
E |
V |
F |
F |
K |
S |
P |
H |
D |
Q |
S |
T |
F |
E |
I |
S |
R |
K |
I |
W |
N |
Q |
T |
G |
K |
I |
I |
gm027827_Glyma1 |
K |
L |
Q |
L |
G |
F |
N |
K |
N |
Q |
L |
V |
E |
K |
L |
R |
R |
L |
K |
K |
K |
Y |
R |
N |
V |
V |
T |
K |
I |
S |
S |
G |
K |
D |
V |
S |
F |
K |
S |
P |
H |
D |
K |
A |
T |
F |
E |
I |
S |
R |
R |
I |
W |
S |
N |
T |
A |
P |
I |
S |
|
AT3G04930.1 |
G |
F |
E |
D |
N |
N |
V |
M |
D |
F |
E |
E |
T |
N |
N |
H |
H |
N |
T |
T |
N |
G |
N |
Y |
S |
T |
F |
N |
S |
P |
S |
S |
N |
P |
T |
L |
E |
L |
D |
S |
E |
N |
G |
I |
E |
K |
K |
L |
T |
M |
S |
S |
S |
S |
V |
S |
R |
K |
R |
S |
gm027827_Glyma1 |
G |
- |
- |
- |
- |
P |
V |
E |
D |
D |
D |
E |
I |
N |
P |
N |
P |
N |
- |
- |
- |
- |
- |
- |
- |
- |
F |
G |
N |
S |
A |
K |
T |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
I |
S |
R |
K |
R |
S |
|
AT3G04930.1 |
R |
S |
R |
I |
G |
K |
I |
E |
E |
D |
N |
K |
P |
V |
I |
T |
P |
S |
D |
G |
P |
I |
A |
- |
- |
- |
- |
- |
S |
N |
V |
N |
L |
N |
E |
A |
A |
A |
V |
G |
I |
G |
G |
N |
L |
G |
G |
L |
I |
E |
E |
T |
V |
K |
N |
C |
V |
S |
P |
V |
gm027827_Glyma1 |
R |
P |
Q |
- |
- |
K |
R |
E |
L |
N |
D |
G |
S |
T |
L |
N |
R |
D |
N |
N |
C |
I |
G |
N |
N |
N |
N |
N |
S |
N |
S |
N |
N |
N |
N |
N |
E |
N |
C |
N |
G |
R |
H |
N |
L |
Q |
G |
L |
I |
E |
E |
T |
V |
K |
S |
C |
V |
S |
P |
V |
|
AT3G04930.1 |
I |
K |
E |
M |
M |
N |
G |
T |
T |
S |
M |
M |
M |
A |
A |
M |
G |
G |
G |
F |
P |
G |
L |
G |
G |
G |
G |
G |
G |
G |
G |
G |
H |
G |
F |
G |
S |
L |
S |
P |
M |
F |
T |
R |
P |
- |
- |
- |
F |
N |
F |
G |
F |
G |
V |
E |
G |
G |
G |
N |
gm027827_Glyma1 |
L |
K |
E |
L |
V |
C |
G |
T |
G |
G |
M |
- |
- |
- |
E |
L |
G |
R |
G |
F |
- |
G |
V |
G |
G |
G |
L |
G |
V |
G |
G |
G |
L |
A |
L |
N |
S |
L |
Q |
T |
Q |
M |
T |
M |
P |
M |
T |
L |
L |
N |
L |
R |
I |
G |
- |
- |
- |
- |
- |
- |
|
AT3G04930.1 |
K |
A |
V |
A |
D |
E |
R |
W |
R |
K |
Q |
Q |
I |
L |
E |
L |
E |
V |
Y |
S |
R |
R |
L |
E |
L |
V |
Q |
E |
Q |
I |
R |
T |
T |
L |
N |
E |
L |
K |
T |
M |
P |
S |
G |
I |
gm027827_Glyma1 |
E |
T |
T |
M |
D |
E |
K |
W |
R |
K |
Q |
Q |
I |
L |
E |
L |
E |
V |
Y |
S |
K |
R |
L |
E |
L |
V |
Q |
D |
E |
I |
K |
V |
A |
L |
E |
E |
L |
R |
S |
- |
A |
G |
G |
V |
|
|