fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G04930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027827 not found in 372aa AT3G04930.1 1st_1st 0.341158059 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G04930.1     MTSDHRDALFSLELESPDPDEGGVADGGESDTDEDLRDNDDVVMPGTNEAEAEDDDPEEE
gm027827_Glyma1 MESDLNDAVFP---------------------EEDLDDDDD------------DETPEDE
                * ** .**:*.                     :*** *:**            *: **:*

AT3G04930.1     DLNSPSTSSLPMVSTISATAVVSGTPTATSSTGAVTVALPAGSAVPVSVIPVDSDPKWHR
gm027827_Glyma1 EDYDDETEPPPFV-----LAVVAVAPPASTASETLDTTL-----IPISAVADSSLKPLH-
                :  . .*.. *:*      ***: :*.*:::: :: .:*     :*:*.:. .*    * 

AT3G04930.1     MTEIVHQRPPIDDSRRLFQRLWTDEDEIELLRGFLDYMTMHRGSSSHPPDTAPFYEQIKS
gm027827_Glyma1 -PELIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDY-TAQRGSSHH-SDTALFYDQIKS
                 .*::.:: .:***************** **:***** * :**** * .*** **:****

AT3G04930.1     KLQLDFNKNQLVEKLRRLKKKYRNVMSKISSGKEVFFKSPHDQSTFEISRKIWNQTGKII
gm027827_Glyma1 KLQLGFNKNQLVEKLRRLKKKYRNVVTKISSGKDVSFKSPHDKATFEISRRIWSNTAPIS
                ****.********************::******:* ******::******:**.:*. * 

AT3G04930.1     GFEDNNVMDFEETNNHHNTTNGNYSTFNSPSSNPTLELDSENGIEKKLTMSSSSVSRKRS
gm027827_Glyma1 G----PVEDDDEINPNPN--------FGNSAKTP--------------------ISRKRS
                *     * * :* * : *        *...:..*                    :*****

AT3G04930.1     RSRIGKIEEDNKPVITPSDGPIA-----SNVNLNEAAAVGIGGNLGGLIEETVKNCVSPV
gm027827_Glyma1 RPQ--KRELNDGSTLNRDNNCIGNNNNNSNSNNNNNENCNGRHNLQGLIEETVKSCVSPV
                *.:  * * :: ..:. .:. *.     ** * *:    .   ** ********.*****

AT3G04930.1     IKEMMNGTTSMMMAAMGGGFPGLGGGGGGGGGHGFGSLSPMFTRP---FNFGFGVEGGGN
gm027827_Glyma1 LKELVCGTGGM---ELGRGF-GVGGGLGVGGGLALNSLQTQMTMPMTLLNLRIG------
                :**:: ** .*    :* ** *:*** * *** .:.**.. :* *   :*: :*      

AT3G04930.1     KAVADERWRKQQILELEVYSRRLELVQEQIRTTLNELKTMPSGI
gm027827_Glyma1 ETTMDEKWRKQQILELEVYSKRLELVQDEIKVALEELRS-AGGV
                ::. **:*************:******::*:.:*:**:: ..*:
BoxShade v3.31 C (beta, 970507) Output
AT3G04930.1     M T S D H R D A L F S L E L E S P D P D E G G V A D G G E S D T D E D L R D N D D V V M P G T N E A E A E D D D P E E E
gm027827_Glyma1    M E S D L N D A V F P - - - - - - - - - - - - - - - - - - - - - E E D L D D D D D - - - - - - - - - - - - D E T P E D E
 
AT3G04930.1     D L N S P S T S S L P M V S T I S A T A V V S G T P T A T S S T G A V T V A L P A G S A V P V S V I P V D S D P K W H R
gm027827_Glyma1    E D Y D D E T E P P P F V - - - - - L A V V A V A P P A S T A S E T L D T T L - - - - - I P I S A V A D S S L K P L H -
 
AT3G04930.1     M T E I V H Q R P P I D D S R R L F Q R L W T D E D E I E L L R G F L D Y M T M H R G S S S H P P D T A P F Y E Q I K S
gm027827_Glyma1    - P E L I E E K K A L D D S R R L F Q R L W T D E D E I G L L Q G F L D Y - T A Q R G S S H H - S D T A L F Y D Q I K S
 
AT3G04930.1     K L Q L D F N K N Q L V E K L R R L K K K Y R N V M S K I S S G K E V F F K S P H D Q S T F E I S R K I W N Q T G K I I
gm027827_Glyma1    K L Q L G F N K N Q L V E K L R R L K K K Y R N V V T K I S S G K D V S F K S P H D K A T F E I S R R I W S N T A P I S
 
AT3G04930.1     G F E D N N V M D F E E T N N H H N T T N G N Y S T F N S P S S N P T L E L D S E N G I E K K L T M S S S S V S R K R S
gm027827_Glyma1    G - - - - P V E D D D E I N P N P N - - - - - - - - F G N S A K T P - - - - - - - - - - - - - - - - - - - - I S R K R S
 
AT3G04930.1     R S R I G K I E E D N K P V I T P S D G P I A - - - - - S N V N L N E A A A V G I G G N L G G L I E E T V K N C V S P V
gm027827_Glyma1    R P Q - - K R E L N D G S T L N R D N N C I G N N N N N S N S N N N N N E N C N G R H N L Q G L I E E T V K S C V S P V
 
AT3G04930.1     I K E M M N G T T S M M M A A M G G G F P G L G G G G G G G G G H G F G S L S P M F T R P - - - F N F G F G V E G G G N
gm027827_Glyma1    L K E L V C G T G G M - - - E L G R G F - G V G G G L G V G G G L A L N S L Q T Q M T M P M T L L N L R I G - - - - - -
 
AT3G04930.1     K A V A D E R W R K Q Q I L E L E V Y S R R L E L V Q E Q I R T T L N E L K T M P S G I
gm027827_Glyma1    E T T M D E K W R K Q Q I L E L E V Y S K R L E L V Q D E I K V A L E E L R S - A G G V
 
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