fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G05690.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031929 LGNVMKLGLGLX in 357/363 AT3G05690.1 1st_1st 0.198214285 Ib
Pt044147 not found in 321aa AT3G05690.1 1st_1st 0.316071428 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G05690.1     MAMQTVR-EGLFSAPQ-----TSWWTAFGSQPLAPESL----AGDSDSFAGVKVGSVGE-
pt044147_POPTR_ MTMKIKEHEGIVHNPSGQLSTVPWWSAFGSQTVTGESCGLLKALPVEQFA---IG--GEA
Sb031929_Sorbi1 ----------MISADN-------------------------------SYA----------
                          :.   .                               .:*          

AT3G05690.1     --------TGQRVDKQSNSATHLAFSLGDVKSPRLVPKPHGATFSMQSPCLE------LG
pt044147_POPTR_ ATKQARMSTDQRLDK--GNITQFTIFPGDCKTSGYGQKNLQAAISLQTALPEYRAHFDLG
Sb031929_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G05690.1     FSQPPIYTKYPYGEQQYYGVVSAY--GSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRR
pt044147_POPTR_ FGQPVICTKYPLVD-QCYGVFSTF--GPQISGRIMLPMSMTADDGPIYVNAKQYHGIMRR
Sb031929_Sorbi1 -------------D-QHYGLISPYPMGATPGGRMLIPLNMPTE-APIYVNAKQYDAIMRR
                             : * **:.*.:  *.   .*:::*:.* :: ..****:***..*:**

AT3G05690.1     RQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAK
pt044147_POPTR_ RKSRAK--AVLENK--STNSRKPYMHYSRHLHAMRRPRGCGGRFLNTKELN-EGKGTMEA
Sb031929_Sorbi1 RRARAK--AERENR--LVKARKPYLHESRHQHALRRPRGSGGRFLNTKK---ESDGKDA-
                *::***  *  :::    ..****:* *** **:*****.********.   *..*.   

AT3G05690.1     KGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNGLN-----VSGSEVTSM-------
pt044147_POPTR_ KKAGDFQ-----PSQATGSQNSEVLESGGATLNSSMEANGGGSIFSGSEVTSMYNRGELD
Sb031929_Sorbi1 -GGGSKATFSNPLMRQVASPSSEIQHSDLG--NPSSVSS-----LSGSEVSSMYDREDMD
                   *.         :   * .**: ..  .  * *   .     .*****:**       

AT3G05690.1     -----NYFLSSPVHSLGGM-------V-MPSKWIAAAAAMDNGCCNFKT-
pt044147_POPTR_ LLQ-INR-LGPTFHSFSGMMDRGHGIV-MPSKWVAAA---DN-CCNLK--
Sb031929_Sorbi1 HYHSFDHLRTPFFTPLTSIMDGDHGVVGNPFKWAAASEV----CCDLLKA
                     :    . . .: .:       *  * ** **:      **::
BoxShade v3.31 C (beta, 970507) Output
AT3G05690.1     M A M Q T V R - E G L F S A P Q - - - - - T S W W T A F G S Q P L A P E S L - - - - A G D S D S F A G V K V G S V G E -
pt044147_POPTR_    M T M K I K E H E G I V H N P S G Q L S T V P W W S A F G S Q T V T G E S C G L L K A L P V E Q F A - - - I G - - G E A
Sb031929_Sorbi1    - - - - - - - - - - M I S A D N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Y A - - - - - - - - - -
 
AT3G05690.1     - - - - - - - - T G Q R V D K Q S N S A T H L A F S L G D V K S P R L V P K P H G A T F S M Q S P C L E - - - - - - L G
pt044147_POPTR_    A T K Q A R M S T D Q R L D K - - G N I T Q F T I F P G D C K T S G Y G Q K N L Q A A I S L Q T A L P E Y R A H F D L G
Sb031929_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G05690.1     F S Q P P I Y T K Y P Y G E Q Q Y Y G V V S A Y - - G S Q - - S R V M L P L N M E T E D S T I Y V N S K Q Y H G I I R R
pt044147_POPTR_    F G Q P V I C T K Y P L V D - Q C Y G V F S T F - - G P Q I S G R I M L P M S M T A D D G P I Y V N A K Q Y H G I M R R
Sb031929_Sorbi1    - - - - - - - - - - - - - D - Q H Y G L I S P Y P M G A T P G G R M L I P L N M P T E - A P I Y V N A K Q Y D A I M R R
 
AT3G05690.1     R Q S R A K A A A V L D Q K K L S S R C R K P Y M H H S R H L H A L R R P R G S G G R F L N T K S Q N L E N S G T N A K
pt044147_POPTR_    R K S R A K - - A V L E N K - - S T N S R K P Y M H Y S R H L H A M R R P R G C G G R F L N T K E L N - E G K G T M E A
Sb031929_Sorbi1    R R A R A K - - A E R E N R - - L V K A R K P Y L H E S R H Q H A L R R P R G S G G R F L N T K K - - - E S D G K D A -
 
AT3G05690.1     K G D G S M Q I Q S Q P K P Q Q S N S Q N S E V V H P E N G T M N L S N G L N - - - - - V S G S E V T S M - - - - - - -
pt044147_POPTR_    K K A G D F Q - - - - - P S Q A T G S Q N S E V L E S G G A T L N S S M E A N G G G S I F S G S E V T S M Y N R G E L D
Sb031929_Sorbi1    - G G G S K A T F S N P L M R Q V A S P S S E I Q H S D L G - - N P S S V S S - - - - - L S G S E V S S M Y D R E D M D
 
AT3G05690.1     - - - - - N Y F L S S P V H S L G G M - - - - - - - V - M P S K W I A A A A A M D N G C C N F K T -
pt044147_POPTR_    L L Q - I N R - L G P T F H S F S G M M D R G H G I V - M P S K W V A A A - - - D N - C C N L K - -
Sb031929_Sorbi1    H Y H S F D H L R T P F F T P L T S I M D G D H G V V G N P F K W A A A S E V - - - - C C D L L K A
 
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