fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G05690.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031929 LGNVMKLGLGLX in 357/363 AT3G05690.1 1st_1st 0.198214285 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G05690.1     MAMQTVREGLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNS
Sb031929_Sorbi1 ---------MISA----------------------DNSYADQHYGLIS------------
                         ::**                      .:*:*. : * :.            

AT3G05690.1     ATHLAFSLGDVKSPRLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYG
Sb031929_Sorbi1 -----------------PYPMGAT---------------------PGG------------
                                 * * ***                     * *            

AT3G05690.1     SQSRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSR
Sb031929_Sorbi1 ---RMLIPLNMPTE-APIYVNAKQYDAIMRRRRARAKA----ERENRLVKARKPYLHESR
                   *:::**** ** :.****:***..*:***::****    ::::   :.****:*.**

AT3G05690.1     HLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPEN
Sb031929_Sorbi1 HQHALRRPRGSGGRFLNTKK---ESDGKDA--GGGSKATFSNPLMRQVASPSSEIQHSDL
                * *****************.   *..*.:*  *.**    *:*  :*  * .**: *.: 

AT3G05690.1     GTMNLSNGLNVSGSEVTS------MNYFLS---------SPVHSL-----GGMVMPSKWI
Sb031929_Sorbi1 G--NPSSVSSLSGSEVSSMYDREDMDHYHSFDHLRTPFFTPLTSIMDGDHGVVGNPFKWA
                *  * *.  .:*****:*      *::: *         :*: *:     * :  * ** 

AT3G05690.1     AAAAAMDNGCCNFKT-
Sb031929_Sorbi1 AASEV----CCDLLKA
                **: .    **:: .
BoxShade v3.31 C (beta, 970507) Output
AT3G05690.1     M A M Q T V R E G L F S A P Q T S W W T A F G S Q P L A P E S L A G D S D S F A G V K V G S V G E T G Q R V D K Q S N S
Sb031929_Sorbi1    - - - - - - - - - M I S A - - - - - - - - - - - - - - - - - - - - - - D N S Y A D Q H Y G L I S - - - - - - - - - - - -
 
AT3G05690.1     A T H L A F S L G D V K S P R L V P K P H G A T F S M Q S P C L E L G F S Q P P I Y T K Y P Y G E Q Q Y Y G V V S A Y G
Sb031929_Sorbi1    - - - - - - - - - - - - - - - - - P Y P M G A T - - - - - - - - - - - - - - - - - - - - - P G G - - - - - - - - - - - -
 
AT3G05690.1     S Q S R V M L P L N M E T E D S T I Y V N S K Q Y H G I I R R R Q S R A K A A A V L D Q K K L S S R C R K P Y M H H S R
Sb031929_Sorbi1    - - - R M L I P L N M P T E - A P I Y V N A K Q Y D A I M R R R R A R A K A - - - - E R E N R L V K A R K P Y L H E S R
 
AT3G05690.1     H L H A L R R P R G S G G R F L N T K S Q N L E N S G T N A K K G D G S M Q I Q S Q P K P Q Q S N S Q N S E V V H P E N
Sb031929_Sorbi1    H Q H A L R R P R G S G G R F L N T K K - - - E S D G K D A - - G G G S K A T F S N P L M R Q V A S P S S E I Q H S D L
 
AT3G05690.1     G T M N L S N G L N V S G S E V T S - - - - - - M N Y F L S - - - - - - - - - S P V H S L - - - - - G G M V M P S K W I
Sb031929_Sorbi1    G - - N P S S V S S L S G S E V S S M Y D R E D M D H Y H S F D H L R T P F F T P L T S I M D G D H G V V G N P F K W A
 
AT3G05690.1     A A A A A M D N G C C N F K T -
Sb031929_Sorbi1    A A S E V - - - - C C D L L K A
 
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