fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G05760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007983 not found in 201aa AT3G05760.1 1st_1st 0.846153846 Ia
Gm007982 not found in 202aa AT3G05760.1 not_1st 0.846153846 II
Gm053031 not found in 202aa AT3G05760.1 not_1st 0.842105263 II
Gm007984 not found in 189aa AT3G05760.1 not_1st 0.753036437 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G05760.1     -MASSNTTTGVDNTFRKKFDVEEFKERAREREKK-ESDRSKSRSKGPPVQRAPLKHRDYH
gm007982_Glyma0 MSNTSNNVAGVDNTFRRKFDREEYLERARERERQEEEGRAKPKGKGPPVQRKPLKHRDYE
gm007983_Glyma0 -MISLNQVAGVDNTFRRKFDREEYLERARERERQEEEGRAKPKGKGPPVQRKPLKHRDYE
gm007984_Glyma0 -MSLGSTTHSEENLIEKSIWNEH--GSARDRRKKVERN----------LKRKPLKHRDYE
gm053031_Glyma1 MSNTSNNVAGVDNTFRRKFDREEYLERARERERQEEEGRAKPKAKGPPVQRKPLKHRDYE
                     . . . :* :.:.:  *.    **:*.:: * .          ::* *******.

AT3G05760.1     VDLESRLGKTQVVTPVAPLSQQAGYFCRVCDCVVKDSANYLDHINGKKHQRALGMSMRVE
gm007982_Glyma0 VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
gm007983_Glyma0 VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
gm007984_Glyma0 VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
gm053031_Glyma1 VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
                *************************:* **:*****************************

AT3G05760.1     RSSLEQVQERFEVLKKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVE
gm007982_Glyma0 RASLEQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAV--
gm007983_Glyma0 RASLEQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAV--
gm007984_Glyma0 RASLEQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAV--
gm053031_Glyma1 RASLQQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAV--
                *:**:*************  *:********** ***:**** ** *********:  *  

AT3G05760.1     EEPEMDPEVAEMMGFGGFGSSKKS
gm007982_Glyma0 EEPEIDPDVAAMMGFGGFRSSNKK
gm007983_Glyma0 EEPEIDPDVAAMMGFGGFRSSNKK
gm007984_Glyma0 EEPEIDPDVAAMMGFGGFRSSNKK
gm053031_Glyma1 EEPEIDPDVAAMMGFGGFRSSNKK
                ****:**:** ******* **:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G05760.1     - M A S S N T T T G V D N T F R K K F D V E E F K E R A R E R E K K - E S D R S K S R S K G P P V Q R A P L K H R D Y H
gm007982_Glyma0    M S N T S N N V A G V D N T F R R K F D R E E Y L E R A R E R E R Q E E E G R A K P K G K G P P V Q R K P L K H R D Y E
gm007983_Glyma0    - M I S L N Q V A G V D N T F R R K F D R E E Y L E R A R E R E R Q E E E G R A K P K G K G P P V Q R K P L K H R D Y E
gm007984_Glyma0    - M S L G S T T H S E E N L I E K S I W N E H - - G S A R D R R K K V E R N - - - - - - - - - - L K R K P L K H R D Y E
gm053031_Glyma1    M S N T S N N V A G V D N T F R R K F D R E E Y L E R A R E R E R Q E E E G R A K P K A K G P P V Q R K P L K H R D Y E
 
AT3G05760.1     V D L E S R L G K T Q V V T P V A P L S Q Q A G Y F C R V C D C V V K D S A N Y L D H I N G K K H Q R A L G M S M R V E
gm007982_Glyma0    V D L E S R L G K T Q V V T P V A P L S Q Q A G Y Y C S V C E C V V K D S A N Y L D H I N G K K H Q R A L G M S M R V E
gm007983_Glyma0    V D L E S R L G K T Q V V T P V A P L S Q Q A G Y Y C S V C E C V V K D S A N Y L D H I N G K K H Q R A L G M S M R V E
gm007984_Glyma0    V D L E S R L G K T Q V V T P V A P L S Q Q A G Y Y C S V C E C V V K D S A N Y L D H I N G K K H Q R A L G M S M R V E
gm053031_Glyma1    V D L E S R L G K T Q V V T P V A P L S Q Q A G Y Y C S V C E C V V K D S A N Y L D H I N G K K H Q R A L G M S M R V E
 
AT3G05760.1     R S S L E Q V Q E R F E V L K K R K A P G T F T E Q D L D E R I R K Q Q E E E E E L K R Q R R E K K K E K K K G K V V E
gm007982_Glyma0    R A S L E Q V Q E R F E V L K K R K D V G S F T E Q D L D E R I L K Q Q Q E E E E R K R L R R E K K K E K K E K A V - -
gm007983_Glyma0    R A S L E Q V Q E R F E V L K K R K D V G S F T E Q D L D E R I L K Q Q Q E E E E R K R L R R E K K K E K K E K A V - -
gm007984_Glyma0    R A S L E Q V Q E R F E V L K K R K D V G S F T E Q D L D E R I L K Q Q Q E E E E R K R L R R E K K K E K K E K A V - -
gm053031_Glyma1    R A S L Q Q V Q E R F E V L K K R K D V G S F T E Q D L D E R I L K Q Q Q E E E E R K R L R R E K K K E K K E K A V - -
 
AT3G05760.1     E E P E M D P E V A E M M G F G G F G S S K K S
gm007982_Glyma0    E E P E I D P D V A A M M G F G G F R S S N K K
gm007983_Glyma0    E E P E I D P D V A A M M G F G G F R S S N K K
gm007984_Glyma0    E E P E I D P D V A A M M G F G G F R S S N K K
gm053031_Glyma1    E E P E I D P D V A A M M G F G G F R S S N K K
 
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