fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041804 not found in 163aa AT3G06120.1 not_1st 0.542199488 II
Pt026431 not found in 303aa AT3G06120.1 not_1st 0.445012787 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06120.1     ------------------------------------------------------------
gm041804_Glyma1 ------------------------------------------------------------
pt026431_POPTR_ MSECLSDFLEEVQPEFGDTTFDGDDLFAIFESLDSVTDFPPVIPLDEVSSSSSALQDFDE
                                                                            

AT3G06120.1     -------------------------------------MSHIAVERNRRRQMNEHLKSLRS
gm041804_Glyma1 -------------------------------------MSHIAVERNRRRQMNEHLKVLRS
pt026431_POPTR_ TNNELETSPKSKRQKIAASAAAIASSDQEVNPDGQQRISHITVERNRRKQMNEHLSVLRS
                                                     :***:******:******. ***

AT3G06120.1     LTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLN-----------RP----
gm041804_Glyma1 LTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGP----SPRT----
pt026431_POPTR_ LMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRIVSSPRPPLSP
                * ****:************:::*:**:*::* **::*:**  .           *.    

AT3G06120.1     -------SFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKI
gm041804_Glyma1 -------LQPMFHQLDSPSMIG----------------TNSFKELGASCNSPVADVEVKI
pt026431_POPTR_ RKPPLSYISPTMATSLEPSPTSSSSSSI----------NDNINELIANSKSAIADVEVKF
                         *      .**  .                ...::*: * .:*. *:**.*:

AT3G06120.1     SGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSME-ETVLYFFVVKIGLECHLS
gm041804_Glyma1 SGSYVILKVICHRIPGQVAKIITVLESLSFEVLHLNISSME-ETVLYQFVVK--------
pt026431_POPTR_ SGPNVLLKTVSPRIPGQAVKIVSALEGLALEILHVSISTVDHETMLNSFTIKIGIECQLS
                **. *:*:.:. ** ** .**::.** *::::**:.**::: **:*  *.:*        

AT3G06120.1     LEELTLEVQKSFVSDEVIVSTN
gm041804_Glyma1 ----------------------
pt026431_POPTR_ AEDLAQQIQQTFC---------
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm041804_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt026431_POPTR_    M S E C L S D F L E E V Q P E F G D T T F D G D D L F A I F E S L D S V T D F P P V I P L D E V S S S S S A L Q D F D E
 
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S H I A V E R N R R R Q M N E H L K S L R S
gm041804_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S H I A V E R N R R R Q M N E H L K V L R S
pt026431_POPTR_    T N N E L E T S P K S K R Q K I A A S A A A I A S S D Q E V N P D G Q Q R I S H I T V E R N R R K Q M N E H L S V L R S
 
AT3G06120.1     L T P C F Y I K R G D Q A S I I G G V I E F I K E L Q Q L V Q V L E S K K R R K T L N - - - - - - - - - - - R P - - - -
gm041804_Glyma1    L T P C F Y I K R G D Q A S I I G G V I E F I K E L H Q V L Q A L E S Q K R R K S L S P S P G P - - - - S P R T - - - -
pt026431_POPTR_    L M P C F Y V K R G D Q A S I I G G V V D Y I N E L Q Q V L Q S L E A K K Q R K V Y S E V L S P R I V S S P R P P L S P
 
AT3G06120.1     - - - - - - - S F P Y D H Q T I E P S S L G A A T T R V P F S R I E N V M T T S T F K E V G A C C N S P H A N V E A K I
gm041804_Glyma1    - - - - - - - L Q P M F H Q L D S P S M I G - - - - - - - - - - - - - - - - T N S F K E L G A S C N S P V A D V E V K I
pt026431_POPTR_    R K P P L S Y I S P T M A T S L E P S P T S S S S S S I - - - - - - - - - - N D N I N E L I A N S K S A I A D V E V K F
 
AT3G06120.1     S G S N V V L R V V S R R I V G Q L V K I I S V L E K L S F Q V L H L N I S S M E - E T V L Y F F V V K I G L E C H L S
gm041804_Glyma1    S G S Y V I L K V I C H R I P G Q V A K I I T V L E S L S F E V L H L N I S S M E - E T V L Y Q F V V K - - - - - - - -
pt026431_POPTR_    S G P N V L L K T V S P R I P G Q A V K I V S A L E G L A L E I L H V S I S T V D H E T M L N S F T I K I G I E C Q L S
 
AT3G06120.1     L E E L T L E V Q K S F V S D E V I V S T N
gm041804_Glyma1    - - - - - - - - - - - - - - - - - - - - - -
pt026431_POPTR_    A E D L A Q Q I Q Q T F C - - - - - - - - -
 
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