fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023149 not found in 227aa AT3G06120.1 1st_1st 0.503836317 Ia
Sb019242 not found in 247aa AT3G06120.1 1st_1st 0.537084398 Ia
Gm036674 not found in 178aa AT3G06120.1 1st_1st 0.590792838 Ia
Pt042769 not found in 206aa AT3G06120.1 1st_1st 0.618925831 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06120.1     MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK
Os023149_Os05t0 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK
Sb019242_Sorbi1 MSHIAVERNRRRQMNEHLKVLRSLTPGLYIKRGDQASIIGGAIEFIKELQQVLESLEARK
pt042769_POPTR_ MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGAIEFIKELHQVLQALESKK
gm036674_Glyma1 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVRQALESQK
                ***************:*** ****** :*************.*:*****: : : **::*

AT3G06120.1     RRKT------LNRPSFPYDHQTIEPSSL--GAATTRVPF------------SRIENVMT-
Os023149_Os05t0 KRRQQPQAHLISPASISAS-GGGSPSPT----PSPRSLITSCSPTAAAGSSAGSSSSISP
Sb019242_Sorbi1 KRRSG--GSFISR-------TSSSPSPT----PSPRSHFLS-------SGSSSAASSSTT
pt042769_POPTR_ QRKS-----------------SLSPSPGPCLSPSPRAPL------------QLITSSLHP
gm036674_Glyma1 RRK------------------SLSPSPG----PSPR--------------------TLQP
                :*:                    .**.     .:.*                        

AT3G06120.1     ------------TSTFKEVGAC-CNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVL
Os023149_Os05t0 KDENKQQ-----LQLVAELAAC-CNSPMADVEARISGANVLLRTLSRRAPP--VRIIALL
Sb019242_Sorbi1 TMATPSPPVAT-TTMIKELAAC-CNSAVADVEAKISGSNVLLRTLSRRIPGQAVRMIAVL
pt042769_POPTR_ DHHNPFPFGNI-ENDLKELGAACCNSPIADVEAKISGSNVILKVISRRIPGQIVRIISVL
gm036674_Glyma1 TFHQLDSSSMIGTNSFKELGAS-CNSPVADVEVKISGSNVILKVICHRIPGQVAKIITVL
                               . *:.*. ***. *:**.:***:**:*:.:.:*     .::*::*

AT3G06120.1     EKLSFQVLHLNISSMEETVLYFFVVK---------IGLECHLSLEELTLEVQKSFV----
Os023149_Os05t0 ESLHLEVLHLNITTMDDTVLYSFVLK---------IGLDCHLSVDDLAMEVHQSFM----
Sb019242_Sorbi1 EGLHLEVLHLNISTMEDTVLHSFVLKARTSTYCMQIGLECQLSVEDLAYEVQQTFVVVCC
pt042769_POPTR_ ENLSFEILHLNISSMEDTVLYSFVIK---------IGLECQVSVEELAVEVQQSFF----
gm036674_Glyma1 ESLSFEVLHLNISSMEETVLYQFVVK---------IELGCQLSLEELAME----------
                * * :::*****::*::***: **:*         * * *::*:::*: *          

AT3G06120.1     -------------SDEV----IVSTN---
Os023149_Os05t0 -------PPPAA-HPDNH---LHS-----
Sb019242_Sorbi1 RDGDLELPEPADQSQENHRLMMYSSAMAI
pt042769_POPTR_ --------------QDT----IYTYEL--
gm036674_Glyma1 -----------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     M S H I A V E R N R R R Q M N E H L K S L R S L T P C F Y I K R G D Q A S I I G G V I E F I K E L Q Q L V Q V L E S K K
Os023149_Os05t0    M S H I A V E R N R R R Q M N D H L K V L R S L T P A F Y I K R G D Q A S I I G G A I D F I K E L Q T L L Q S L E A Q K
Sb019242_Sorbi1    M S H I A V E R N R R R Q M N E H L K V L R S L T P G L Y I K R G D Q A S I I G G A I E F I K E L Q Q V L E S L E A R K
pt042769_POPTR_    M S H I A V E R N R R R Q M N E H L K V L R S L T P C F Y I K R G D Q A S I I G G A I E F I K E L H Q V L Q A L E S K K
gm036674_Glyma1    M S H I A V E R N R R R Q M N E H L K V L R S L T P C F Y I K R G D Q A S I I G G V I E F I K E L H Q V R Q A L E S Q K
 
AT3G06120.1     R R K T - - - - - - L N R P S F P Y D H Q T I E P S S L - - G A A T T R V P F - - - - - - - - - - - - S R I E N V M T -
Os023149_Os05t0    K R R Q Q P Q A H L I S P A S I S A S - G G G S P S P T - - - - P S P R S L I T S C S P T A A A G S S A G S S S S I S P
Sb019242_Sorbi1    K R R S G - - G S F I S R - - - - - - - T S S S P S P T - - - - P S P R S H F L S - - - - - - - S G S S S A A S S S T T
pt042769_POPTR_    Q R K S - - - - - - - - - - - - - - - - - S L S P S P G P C L S P S P R A P L - - - - - - - - - - - - Q L I T S S L H P
gm036674_Glyma1    R R K - - - - - - - - - - - - - - - - - - S L S P S P G - - - - P S P R - - - - - - - - - - - - - - - - - - - - T L Q P
 
AT3G06120.1     - - - - - - - - - - - - T S T F K E V G A C - C N S P H A N V E A K I S G S N V V L R V V S R R I V G Q L V K I I S V L
Os023149_Os05t0    K D E N K Q Q - - - - - L Q L V A E L A A C - C N S P M A D V E A R I S G A N V L L R T L S R R A P P - - V R I I A L L
Sb019242_Sorbi1    T M A T P S P P V A T - T T M I K E L A A C - C N S A V A D V E A K I S G S N V L L R T L S R R I P G Q A V R M I A V L
pt042769_POPTR_    D H H N P F P F G N I - E N D L K E L G A A C C N S P I A D V E A K I S G S N V I L K V I S R R I P G Q I V R I I S V L
gm036674_Glyma1    T F H Q L D S S S M I G T N S F K E L G A S - C N S P V A D V E V K I S G S N V I L K V I C H R I P G Q V A K I I T V L
 
AT3G06120.1     E K L S F Q V L H L N I S S M E E T V L Y F F V V K - - - - - - - - - I G L E C H L S L E E L T L E V Q K S F V - - - -
Os023149_Os05t0    E S L H L E V L H L N I T T M D D T V L Y S F V L K - - - - - - - - - I G L D C H L S V D D L A M E V H Q S F M - - - -
Sb019242_Sorbi1    E G L H L E V L H L N I S T M E D T V L H S F V L K A R T S T Y C M Q I G L E C Q L S V E D L A Y E V Q Q T F V V V C C
pt042769_POPTR_    E N L S F E I L H L N I S S M E D T V L Y S F V I K - - - - - - - - - I G L E C Q V S V E E L A V E V Q Q S F F - - - -
gm036674_Glyma1    E S L S F E V L H L N I S S M E E T V L Y Q F V V K - - - - - - - - - I E L G C Q L S L E E L A M E - - - - - - - - - -
 
AT3G06120.1     - - - - - - - - - - - - - S D E V - - - - I V S T N - - -
Os023149_Os05t0    - - - - - - - P P P A A - H P D N H - - - L H S - - - - -
Sb019242_Sorbi1    R D G D L E L P E P A D Q S Q E N H R L M M Y S S A M A I
pt042769_POPTR_    - - - - - - - - - - - - - - Q D T - - - - I Y T Y E L - -
gm036674_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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