fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023482 not found in 323aa AT5G53210.1 not_not 0.419437340 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06120.1     ------------------------------------------------------------
pt023482_POPTR_ MTESLSDFLEEVQPEFGDTAFDADDLFAIFESLDSVTDFPPSSSSNALHDFDETNNELET
                                                                            

AT3G06120.1     ------------------------------MSHIAVERNRRRQMNEHLKSLRSLTPCFYI
pt023482_POPTR_ SPKSKRQKISASAAATASSDQEVNPDGQQRMSHITVERNRRKQMNEHLSVLRSLMPCFYV
                                              ****:******:******. **** ****:

AT3G06120.1     KRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLN-----------RPS----------
pt023482_POPTR_ KRGDQASIIGGVVDYINELQQVLQSLEAKKKRKVYSEVLSPRIVSSPRPSPLSPRKPPLS
                ************:::*:****::* **:**:**. .           ***          

AT3G06120.1     ----FPYDHQTIEPSSLGAATTRVPFS-RI----------ENVMTTS-----------TF
pt023482_POPTR_ PRLNLPISPRTPQPCS--------PYKPRILQQGYLSPTMANSLESSPSPSSSSSINDNI
                    :* . :* :*.*        *:. **           * : :*           .:

AT3G06120.1     KEVGACCNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSME-
pt023482_POPTR_ NELVANSKSAIADVEVKFSGPNVLLKTVSPQIPGQAVKIISALEDLALEILHVSISIVDH
                :*: * .:*. *:**.*:**.**:*:.** :* ** *****.**.*::::**:.** :: 

AT3G06120.1     ETVLYFFVVKIGLECHLSLEELTLEVQKSFVSDEVIVSTN
pt023482_POPTR_ ETMLNSFTIKIGIECQLSAEELAQQIQLTFC---------
                **:*  *.:***:**:** ***: ::* :*
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023482_POPTR_    M T E S L S D F L E E V Q P E F G D T A F D A D D L F A I F E S L D S V T D F P P S S S S N A L H D F D E T N N E L E T
 
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S H I A V E R N R R R Q M N E H L K S L R S L T P C F Y I
pt023482_POPTR_    S P K S K R Q K I S A S A A A T A S S D Q E V N P D G Q Q R M S H I T V E R N R R K Q M N E H L S V L R S L M P C F Y V
 
AT3G06120.1     K R G D Q A S I I G G V I E F I K E L Q Q L V Q V L E S K K R R K T L N - - - - - - - - - - - R P S - - - - - - - - - -
pt023482_POPTR_    K R G D Q A S I I G G V V D Y I N E L Q Q V L Q S L E A K K K R K V Y S E V L S P R I V S S P R P S P L S P R K P P L S
 
AT3G06120.1     - - - - F P Y D H Q T I E P S S L G A A T T R V P F S - R I - - - - - - - - - - E N V M T T S - - - - - - - - - - - T F
pt023482_POPTR_    P R L N L P I S P R T P Q P C S - - - - - - - - P Y K P R I L Q Q G Y L S P T M A N S L E S S P S P S S S S S I N D N I
 
AT3G06120.1     K E V G A C C N S P H A N V E A K I S G S N V V L R V V S R R I V G Q L V K I I S V L E K L S F Q V L H L N I S S M E -
pt023482_POPTR_    N E L V A N S K S A I A D V E V K F S G P N V L L K T V S P Q I P G Q A V K I I S A L E D L A L E I L H V S I S I V D H
 
AT3G06120.1     E T V L Y F F V V K I G L E C H L S L E E L T L E V Q K S F V S D E V I V S T N
pt023482_POPTR_    E T M L N S F T I K I G I E C Q L S A E E L A Q Q I Q L T F C - - - - - - - - -
 
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