fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042769 not found in 206aa AT3G06120.1 1st_1st 0.618925831 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06120.1     MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK
pt042769_POPTR_ MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGAIEFIKELHQVLQALESKK
                ******************* *********************.*******:*::*.*****

AT3G06120.1     RRKTLNRPSFPYDHQTIEPS---SLGAATTRV--------PFSRIENVMTTSTFKEVG-A
pt042769_POPTR_ QRKSSLSPS---PGPCLSPSPRAPLQLITSSLHPDHHNPFPFGNIEN-----DLKELGAA
                :**:   **       :.**   .*   *: :        **..***      :**:* *

AT3G06120.1     CCNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYF
pt042769_POPTR_ CCNSPIADVEAKISGSNVILKVISRRIPGQIVRIISVLENLSFEILHLNISSMEDTVLYS
                ***** *:**********:*:*:**** **:*:******:***::*********:**** 

AT3G06120.1     FVVKIGLECHLSLEELTLEVQKSFVSDEVIVSTN
pt042769_POPTR_ FVIKIGLECQVSVEELAVEVQQSFFQDTIYTYEL
                **:******::*:***::***:**..* : .
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     M S H I A V E R N R R R Q M N E H L K S L R S L T P C F Y I K R G D Q A S I I G G V I E F I K E L Q Q L V Q V L E S K K
pt042769_POPTR_    M S H I A V E R N R R R Q M N E H L K V L R S L T P C F Y I K R G D Q A S I I G G A I E F I K E L H Q V L Q A L E S K K
 
AT3G06120.1     R R K T L N R P S F P Y D H Q T I E P S - - - S L G A A T T R V - - - - - - - - P F S R I E N V M T T S T F K E V G - A
pt042769_POPTR_    Q R K S S L S P S - - - P G P C L S P S P R A P L Q L I T S S L H P D H H N P F P F G N I E N - - - - - D L K E L G A A
 
AT3G06120.1     C C N S P H A N V E A K I S G S N V V L R V V S R R I V G Q L V K I I S V L E K L S F Q V L H L N I S S M E E T V L Y F
pt042769_POPTR_    C C N S P I A D V E A K I S G S N V I L K V I S R R I P G Q I V R I I S V L E N L S F E I L H L N I S S M E D T V L Y S
 
AT3G06120.1     F V V K I G L E C H L S L E E L T L E V Q K S F V S D E V I V S T N
pt042769_POPTR_    F V I K I G L E C Q V S V E E L A V E V Q Q S F F Q D T I Y T Y E L
 
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