fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041804 not found in 163aa AT3G06120.1 not_1st 0.542199488 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06120.1     MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK
gm041804_Glyma1 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQK
                ******************* *****************************:*::*.***:*

AT3G06120.1     RRKTLN-------RPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSP
gm041804_Glyma1 RRKSLSPSPGPSPRTLQPMFHQLDSPSMIG----------------TNSFKELGASCNSP
                ***:*.       *.  *  **  .** :*                *.:***:**.****

AT3G06120.1     HANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI
gm041804_Glyma1 VADVEVKISGSYVILKVICHRIPGQVAKIITVLESLSFEVLHLNISSMEETVLYQFVVK-
                 *:**.***** *:*:*:.:** **:.***:***.***:*************** **** 

AT3G06120.1     GLECHLSLEELTLEVQKSFVSDEVIVSTN
gm041804_Glyma1 -----------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     M S H I A V E R N R R R Q M N E H L K S L R S L T P C F Y I K R G D Q A S I I G G V I E F I K E L Q Q L V Q V L E S K K
gm041804_Glyma1    M S H I A V E R N R R R Q M N E H L K V L R S L T P C F Y I K R G D Q A S I I G G V I E F I K E L H Q V L Q A L E S Q K
 
AT3G06120.1     R R K T L N - - - - - - - R P S F P Y D H Q T I E P S S L G A A T T R V P F S R I E N V M T T S T F K E V G A C C N S P
gm041804_Glyma1    R R K S L S P S P G P S P R T L Q P M F H Q L D S P S M I G - - - - - - - - - - - - - - - - T N S F K E L G A S C N S P
 
AT3G06120.1     H A N V E A K I S G S N V V L R V V S R R I V G Q L V K I I S V L E K L S F Q V L H L N I S S M E E T V L Y F F V V K I
gm041804_Glyma1    V A D V E V K I S G S Y V I L K V I C H R I P G Q V A K I I T V L E S L S F E V L H L N I S S M E E T V L Y Q F V V K -
 
AT3G06120.1     G L E C H L S L E E L T L E V Q K S F V S D E V I V S T N
gm041804_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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