fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010746 not found in 328aa AT5G53210.1 not_not 0.421994884 III
Gm003863 not found in 399aa AT3G24140.1 not_not 0.409207161 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06120.1     ------------------------------------------------------------
gm003863_Glyma0 MKFQQGSGDENNNIGSMVDYMPQTTTTLPPHGFYGTATSAATTSYDKLSFADVMQFADFG
gm010746_Glyma0 ----------------MDD-----------------------------SLCDIFDDKEFG
                                                                            

AT3G06120.1     ------------------------------------------------------------
gm003863_Glyma0 PKLALNQAKSCEESAIDPVYFLKFPVLNDKMEEDHQQNMMVNNDDPDGDEAENHHHLDER
gm010746_Glyma0 S----------EHFGGDDL----FAIL-ESLESD-----FTDFPPPINEEA---------
                                                                            

AT3G06120.1     ------------------------------------------------------------
gm003863_Glyma0 FNLVSVEGKDQGMMMREDEETTRVSDDNNNSVQIRFLGHEEPQQKNCAVQENKNGKKKRP
gm010746_Glyma0 --VVAASTSSSAPLDSETELET-------------------------------SSKTKRQ
                                                                            

AT3G06120.1     -----------------MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVI
gm003863_Glyma0 R-TVKTSEEVE---SQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAI
gm010746_Glyma0 KLTPTTPEEANPDGQQKMSHITVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVV
                                 *:**:******:******  **** *  *::**********.:

AT3G06120.1     EFIKELQQLVQVLESKKRRKTLN-----------RPS----------------FPYDHQT
gm003863_Glyma0 EFVRELEQLLQCLESQKRRRLLGEA-QARQVG--DPSLVAQQQQQPPFFPT--LPI----
gm010746_Glyma0 DYISELQQVLQALEAKKQRKVYSEVLSPRLVSSPRPSPLS--PRKPPLSPRLNLPISPRT
                ::: **:*::* **::*:*:  .            **                :*     

AT3G06120.1     IEPS------------------------SLGAATTRVPFSRIENVMTTSTFKEVGACCNS
gm003863_Glyma0 -------------------------------------PNEQMKLVEMETGLREETAECKS
gm010746_Glyma0 PQPGSPYRPRLQAQQGYNNIISPTMSNVSLDPSPTSSANSSIND-----NINELVANSKS
                                                     . . ::       :.*  * .:*

AT3G06120.1     PHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNIS-SMEETVLYFFVV
gm003863_Glyma0 CLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNIT-TIEQTVLYSFNV
gm010746_Glyma0 PTADVEVKFSGPHVLLKTVSQRIPGQAMKIITALEDLALEIVHVNINCAADDTMLNSFTI
                  *:**.*: * ..::: :*:*  ** :* *:.**.* : ::* **. : ::*:*  * :

AT3G06120.1     KIGLECHLSLEELTLEVQKSFVSDEVIVSTN---
gm003863_Glyma0 KVASDSRFTAEDIASSVQQIFN----FIHANTSM
gm010746_Glyma0 KIGIECQLSAEELAQQIQQTFC------------
                *:. :.::: *::: .:*: *
BoxShade v3.31 C (beta, 970507) Output
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm003863_Glyma0    M K F Q Q G S G D E N N N I G S M V D Y M P Q T T T T L P P H G F Y G T A T S A A T T S Y D K L S F A D V M Q F A D F G
gm010746_Glyma0    - - - - - - - - - - - - - - - - M D D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L C D I F D D K E F G
 
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm003863_Glyma0    P K L A L N Q A K S C E E S A I D P V Y F L K F P V L N D K M E E D H Q Q N M M V N N D D P D G D E A E N H H H L D E R
gm010746_Glyma0    S - - - - - - - - - - E H F G G D D L - - - - F A I L - E S L E S D - - - - - F T D F P P P I N E E A - - - - - - - - -
 
AT3G06120.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm003863_Glyma0    F N L V S V E G K D Q G M M M R E D E E T T R V S D D N N N S V Q I R F L G H E E P Q Q K N C A V Q E N K N G K K K R P
gm010746_Glyma0    - - V V A A S T S S S A P L D S E T E L E T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S K T K R Q
 
AT3G06120.1     - - - - - - - - - - - - - - - - - M S H I A V E R N R R R Q M N E H L K S L R S L T P C F Y I K R G D Q A S I I G G V I
gm003863_Glyma0    R - T V K T S E E V E - - - S Q R M T H I A V E R N R R K Q M N E H L R V L R S L M P G S Y V Q R G D Q A S I I G G A I
gm010746_Glyma0    K L T P T T P E E A N P D G Q Q K M S H I T V E R N R R K Q M N E H L T V L R S L M P C F Y V K R G D Q A S I I G G V V
 
AT3G06120.1     E F I K E L Q Q L V Q V L E S K K R R K T L N - - - - - - - - - - - R P S - - - - - - - - - - - - - - - - F P Y D H Q T
gm003863_Glyma0    E F V R E L E Q L L Q C L E S Q K R R R L L G E A - Q A R Q V G - - D P S L V A Q Q Q Q Q P P F F P T - - L P I - - - -
gm010746_Glyma0    D Y I S E L Q Q V L Q A L E A K K Q R K V Y S E V L S P R L V S S P R P S P L S - - P R K P P L S P R L N L P I S P R T
 
AT3G06120.1     I E P S - - - - - - - - - - - - - - - - - - - - - - - - S L G A A T T R V P F S R I E N V M T T S T F K E V G A C C N S
gm003863_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P N E Q M K L V E M E T G L R E E T A E C K S
gm010746_Glyma0    P Q P G S P Y R P R L Q A Q Q G Y N N I I S P T M S N V S L D P S P T S S A N S S I N D - - - - - N I N E L V A N S K S
 
AT3G06120.1     P H A N V E A K I S G S N V V L R V V S R R I V G Q L V K I I S V L E K L S F Q V L H L N I S - S M E E T V L Y F F V V
gm003863_Glyma0    C L A D V E V K L L G F D A M I K I L S R R R P G Q L I K T I A A L E D L Q L I I L H T N I T - T I E Q T V L Y S F N V
gm010746_Glyma0    P T A D V E V K F S G P H V L L K T V S Q R I P G Q A M K I I T A L E D L A L E I V H V N I N C A A D D T M L N S F T I
 
AT3G06120.1     K I G L E C H L S L E E L T L E V Q K S F V S D E V I V S T N - - -
gm003863_Glyma0    K V A S D S R F T A E D I A S S V Q Q I F N - - - - F I H A N T S M
gm010746_Glyma0    K I G I E C Q L S A E E L A Q Q I Q Q T F C - - - - - - - - - - - -
 
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