fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041132 not found in 392aa AT2G47900.2 1st_not 0.603174603 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06380.1     -MTFRSLLQEMRSRPHRVVHAAAST--------ANSSDPFSWSELPEELLREILIRVETV
pt041132_POPTR_ MSAIKSIIN--RSRSHRVVQYSSAPDLSLFGGGCGAETTSCWANLPQELLREVLIRIEES
                  :::*:::  ***.****: :::.        ..:. . .*::**:*****:***:*  

AT3G06380.1     DGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKR
pt041132_POPTR_ E-SSWPPRKNVVACAGVCRSWRDITKELVKVPELSGKLTFPISVKQPGPRDFLLQCFIKR
                : ..**.*:************* :***:* ***:*.*******:**.**** *:******

AT3G06380.1     NRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRS
pt041132_POPTR_ CRSAQTYRLYLGLNNALTEDGKFLLAARKCRRPTCTDYIISLDTDDMSKGSNAYVGKLRS
                 *.:*:*:*****..:**::******* * :*.********* :**:** ****:*::**

AT3G06380.1     NFLGTKFTVFDGSQTGA-AKMQKSRSS---NFIKVSPRVPQGSYPIAHISYELNVLGSRG
pt041132_POPTR_ NFLGTKFTVFDGQPPHAGAKMTKSRSSRLVNLKQVSPRVPTGNYPVASISYELNVLGSRG
                ************. . * *** *****   *: :****** *.**:* ************

AT3G06380.1     PRRMRCIMDTIPMSIVESRGVVASTSISSFSSR------SSPVFRSHS---KPLRSNSAS
pt041132_POPTR_ PRRMHCIMDAIPASAIEPGGIAPTQ--TEFSHHNVDFLPSLPFFRSKSNRVESFQSGSLS
                ****:****:** * :*. *:..:   :.** :      * *.***:*   :.::*.* *

AT3G06380.1     CSDSGNNLGDPPLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQL-VAVSDCEAGQTS
pt041132_POPTR_ SQREG------ALVLKNKAPRWHEQLQCWCLNFHGRVTVASVKNFQLVVSPENGPAGPEH
                .. .*      .***.**********:******************** *: .:  **   

AT3G06380.1     ERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
pt041132_POPTR_ ENIILQFGKVGKDLFTMDYRYPISAFQAFALCLSSFDTKIACE
                *.***********:***** **********:*****:*:****
BoxShade v3.31 C (beta, 970507) Output
AT3G06380.1     - M T F R S L L Q E M R S R P H R V V H A A A S T - - - - - - - - A N S S D P F S W S E L P E E L L R E I L I R V E T V
pt041132_POPTR_    M S A I K S I I N - - R S R S H R V V Q Y S S A P D L S L F G G G C G A E T T S C W A N L P Q E L L R E V L I R I E E S
 
AT3G06380.1     D G G D W P S R R N V V A C A G V C R S W R I L T K E I V A V P E F S S K L T F P I S L K Q S G P R D S L V Q C F I K R
pt041132_POPTR_    E - S S W P P R K N V V A C A G V C R S W R D I T K E L V K V P E L S G K L T F P I S V K Q P G P R D F L L Q C F I K R
 
AT3G06380.1     N R N T Q S Y H L Y L G L T T S L T D N G K F L L A A S K L K R A T C T D Y I I S L R S D D I S K R S N A Y L G R M R S
pt041132_POPTR_    C R S A Q T Y R L Y L G L N N A L T E D G K F L L A A R K C R R P T C T D Y I I S L D T D D M S K G S N A Y V G K L R S
 
AT3G06380.1     N F L G T K F T V F D G S Q T G A - A K M Q K S R S S - - - N F I K V S P R V P Q G S Y P I A H I S Y E L N V L G S R G
pt041132_POPTR_    N F L G T K F T V F D G Q P P H A G A K M T K S R S S R L V N L K Q V S P R V P T G N Y P V A S I S Y E L N V L G S R G
 
AT3G06380.1     P R R M R C I M D T I P M S I V E S R G V V A S T S I S S F S S R - - - - - - S S P V F R S H S - - - K P L R S N S A S
pt041132_POPTR_    P R R M H C I M D A I P A S A I E P G G I A P T Q - - T E F S H H N V D F L P S L P F F R S K S N R V E S F Q S G S L S
 
AT3G06380.1     C S D S G N N L G D P P L V L S N K A P R W H E Q L R C W C L N F H G R V T V A S V K N F Q L - V A V S D C E A G Q T S
pt041132_POPTR_    S Q R E G - - - - - - A L V L K N K A P R W H E Q L Q C W C L N F H G R V T V A S V K N F Q L V V S P E N G P A G P E H
 
AT3G06380.1     E R I I L Q F G K V G K D M F T M D Y G Y P I S A F Q A F A I C L S S F E T R I A C E
pt041132_POPTR_    E N I I L Q F G K V G K D L F T M D Y R Y P I S A F Q A F A L C L S S F D T K I A C E
 
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