fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032660 ACQGAALRLSLAFLDS in 197/692 AT1G25280.1 1st_not 0.509379509 II
SPLIMGLSLMLAGQAE in 382/692
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06380.1     ---MTFRSLLQEMR------SRP---------------HR-----VVHAAASTANSSDPF
Sb032660_Sorbi1 LAKMSFRSIVRDVRDSFGSLSRRSFEVTIAGLSGLTVHHRGKSQSTVHEVCDTDLIIQES
                   *:***:::::*      **                **     .** ...*    :  

AT3G06380.1     SWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTF
Sb032660_Sorbi1 RWANLPPELLRDVIRRLEASE-STWPNRKHVVSCAAVCRAWREMCREIVLSPEFCGKLTF
                 *::** ****::: *:*: : . **.*::**:**.***:** : :***  ***..****

AT3G06380.1     PISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTS-LTDNGKFLLAASKLKRATCTDYI
Sb032660_Sorbi1 PVSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLMENGKFLLSAKRNRKTTCTEYV
                *:****.****.::******::...:***** *:*: * :******:*.: :::***:*:

AT3G06380.1     ISLRSDDISKRSNAYLGRMRSNFLGTKFTVFDGSQ--TGAAKMQKSRSS---NFIKVSPR
Sb032660_Sorbi1 ISMDAENISRSSSTYIGKLRSNFLGTKFMISDTQPPYNGAVVPHAGRTSRRFNSKKVSPK
                **: :::**: *.:*:*::********* : * .   .**.  : .*:*   *  ****:

AT3G06380.1     VPQGSYPIAHISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVAST-------------
Sb032660_Sorbi1 VPTGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASAVEPGGIVPGQPEQILPRALEESF
                ** *** **:::*******:******:*:*.:** * **. *:*..              

AT3G06380.1     -SISSFSSRSSPVFRS--HSKPLRSNSASCSD-------SGNNLG---DPPLVLSNKAPR
Sb032660_Sorbi1 RSTTSF-SKSSIMDRSMDFSSSRDFSSARFSDIAGGAAIAGDEEGQNKERPLVLRNKAPR
                 * :** *:** : **  .*..   .**  **       :*:: *   : **** *****

AT3G06380.1     WHEQLRCWCLNFHGRVTVASVKNFQLVAV--------------SDCEAGQTSERIILQFG
Sb032660_Sorbi1 WHEQLQCWCLNFRGRVTIASVKNFQLIAAPSPAPAPAARAPTPSSQPVPQDQDKIILQFG
                *****:******:****:********:*.              *.  . * .::******

AT3G06380.1     KVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
Sb032660_Sorbi1 KVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                **.******** **:*************:*::***
BoxShade v3.31 C (beta, 970507) Output
AT3G06380.1     - - - M T F R S L L Q E M R - - - - - - S R P - - - - - - - - - - - - - - - H R - - - - - V V H A A A S T A N S S D P F
Sb032660_Sorbi1    L A K M S F R S I V R D V R D S F G S L S R R S F E V T I A G L S G L T V H H R G K S Q S T V H E V C D T D L I I Q E S
 
AT3G06380.1     S W S E L P E E L L R E I L I R V E T V D G G D W P S R R N V V A C A G V C R S W R I L T K E I V A V P E F S S K L T F
Sb032660_Sorbi1    R W A N L P P E L L R D V I R R L E A S E - S T W P N R K H V V S C A A V C R A W R E M C R E I V L S P E F C G K L T F
 
AT3G06380.1     P I S L K Q S G P R D S L V Q C F I K R N R N T Q S Y H L Y L G L T T S - L T D N G K F L L A A S K L K R A T C T D Y I
Sb032660_Sorbi1    P V S L K Q P G P R D G M I Q C F I K R D K S K S T Y H L Y L C L S T A V L M E N G K F L L S A K R N R K T T C T E Y V
 
AT3G06380.1     I S L R S D D I S K R S N A Y L G R M R S N F L G T K F T V F D G S Q - - T G A A K M Q K S R S S - - - N F I K V S P R
Sb032660_Sorbi1    I S M D A E N I S R S S S T Y I G K L R S N F L G T K F M I S D T Q P P Y N G A V V P H A G R T S R R F N S K K V S P K
 
AT3G06380.1     V P Q G S Y P I A H I S Y E L N V L G S R G P R R M R C I M D T I P M S I V E S R G V V A S T - - - - - - - - - - - - -
Sb032660_Sorbi1    V P T G S Y N I A Q V T Y E L N V L G T R G P R R M H C V M H S I P A S A V E P G G I V P G Q P E Q I L P R A L E E S F
 
AT3G06380.1     - S I S S F S S R S S P V F R S - - H S K P L R S N S A S C S D - - - - - - - S G N N L G - - - D P P L V L S N K A P R
Sb032660_Sorbi1    R S T T S F - S K S S I M D R S M D F S S S R D F S S A R F S D I A G G A A I A G D E E G Q N K E R P L V L R N K A P R
 
AT3G06380.1     W H E Q L R C W C L N F H G R V T V A S V K N F Q L V A V - - - - - - - - - - - - - - S D C E A G Q T S E R I I L Q F G
Sb032660_Sorbi1    W H E Q L Q C W C L N F R G R V T I A S V K N F Q L I A A P S P A P A P A A R A P T P S S Q P V P Q D Q D K I I L Q F G
 
AT3G06380.1     K V G K D M F T M D Y G Y P I S A F Q A F A I C L S S F E T R I A C E
Sb032660_Sorbi1    K V A K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
0