fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024977 GLEGPMLRLGLDGGGE in 41/646 AT2G47850.3 1st_not 0.427680798 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06410.1     MERYGRP---GEEGSRSDPSLEWTSHGGE---------TAVEAPMWRLGLSGGGGGG---
Sb024977_Sorbi1 ME----PPHAAEEAAAAAAAAGAGGGGGEGGGGGASPGTGLEGPMLRLGLDGGGEEGEDG
                **    *   .**.: : .:    . ***         *.:*.** ****.***  *   

AT3G06410.1     --GGGES----YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVI--GGVR-GEAGA
Sb024977_Sorbi1 ELGAGEEADARLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQD
                  *.**.     ****.*.** ******.**:*.***:*******..   **.: * *  

AT3G06410.1     LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSY
Sb024977_Sorbi1 FPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQ---DGSVQSVILNNNGFPLRPGEKECSY
                :*** *:***:::::*******:.******:*   .*** .* *.  *:***********

AT3G06410.1     YLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYG
Sb024977_Sorbi1 YMKTGQCKFGSTCKFHHP---EFGGIPVTP------------GIYPPLQSASVPSPHTYA
                *::******* **:*:**    . * *  *             ***.*** *:**.: *.

AT3G06410.1     --LVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSI
Sb024977_Sorbi1 PNWQMGRSPAVPGSYIPGSY-TPMMLSSGMVPLQGWSPYPASVTPVASGGAQQTVQAGPL
                    : *.. :.***: ..* .**:*..**** .**.** **::.:.* *:* :: :..:

AT3G06410.1     YGLTPL-SPSATAYTGTYQSVPSSNSTSKE--------FPQRPDQPECQYFMRTGDCKFG
Sb024977_Sorbi1 YGIGHHGSSTAIAYGGTY--LPYSSSTGQSSNNHQEHGFPERPGQPECQYFMRTGDCKFG
                **:    *.:* ** ***  :* *.**.:.        **:**.****************

AT3G06410.1     SSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLS
Sb024977_Sorbi1 NTCKYNHPRDWSAPKSNYMFSHLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM-GTLG
                .:*:*:** *  .**:. ::* : ******.  *:::**:* *::* ***:**.* .:*.

AT3G06410.1     YSPSASSLTDMPVAPYPIGSSSLSGSSAPVSSSNE--PTKEAVTPAVSSMVSGLSRPEP-
Sb024977_Sorbi1 YSSSALPLSDMSIAPYPIGFS--VATLAPSSSSPEYISTKD---PSINQVASPVAAPEPV
                **.** .*:**.:****** *   .: ** *** *  .**:   *::..:.* :: *** 

AT3G06410.1     ------------------AETSGDSASVSGSIEAKTSS
Sb024977_Sorbi1 GAILPKGVFPPDTIMRTQTSTSVGSSSPGGGR------
                                  :.** .*:* .*.
BoxShade v3.31 C (beta, 970507) Output
AT3G06410.1     M E R Y G R P - - - G E E G S R S D P S L E W T S H G G E - - - - - - - - - T A V E A P M W R L G L S G G G G G G - - -
Sb024977_Sorbi1    M E - - - - P P H A A E E A A A A A A A A G A G G G G G E G G G G G A S P G T G L E G P M L R L G L D G G G E E G E D G
 
AT3G06410.1     - - G G G E S - - - - Y P E R P D E P D C I Y Y L R T G V C G Y G S R C R F N H P R D R G A V I - - G G V R - G E A G A
Sb024977_Sorbi1    E L G A G E E A D A R L P E R P G E A D C G Y Y L R T G A C G F G E R C R Y N H P R D R G G T E F G G G A K N G A A Q D
 
AT3G06410.1     L P E R M G H P V C Q H F M R T G T C K F G A S C K Y H H P R Q G G G G G S V A P V S L S Y L G Y P L R P G E K E C S Y
Sb024977_Sorbi1    F P E R Q G Q P V C E Y Y L K T G T C K F G S N C K Y H H P K Q - - - D G S V Q S V I L N N N G F P L R P G E K E C S Y
 
AT3G06410.1     Y L R T G Q C K F G L T C R F N H P V P L A V Q G P P Q Q P Q Q Q Q P Q P Q P Q L Q T I Y P T L Q S Q S I P S S Q Q Y G
Sb024977_Sorbi1    Y M K T G Q C K F G S T C K F H H P - - - E F G G I P V T P - - - - - - - - - - - - G I Y P P L Q S A S V P S P H T Y A
 
AT3G06410.1     - - L V L T R P S F L T G S Y L Q S P Y G P P M V L P P G M V P Y S G W N P Y Q A S L S A M P S P G T Q P S I G S S S I
Sb024977_Sorbi1    P N W Q M G R S P A V P G S Y I P G S Y - T P M M L S S G M V P L Q G W S P Y P A S V T P V A S G G A Q Q T V Q A G P L
 
AT3G06410.1     Y G L T P L - S P S A T A Y T G T Y Q S V P S S N S T S K E - - - - - - - - F P Q R P D Q P E C Q Y F M R T G D C K F G
Sb024977_Sorbi1    Y G I G H H G S S T A I A Y G G T Y - - L P Y S S S T G Q S S N N H Q E H G F P E R P G Q P E C Q Y F M R T G D C K F G
 
AT3G06410.1     S S C R Y H H P V D A V P P K T G I V L S S I G L P L R P G V A Q C T H F A Q H G I C K F G P A C K F D H S M S S S L S
Sb024977_Sorbi1    N T C K Y N H P R D W S A P K S N Y M F S H L C L P L R P G A Q P C A Y Y A Q N G Y C R Y G V A C K Y D H P M - G T L G
 
AT3G06410.1     Y S P S A S S L T D M P V A P Y P I G S S S L S G S S A P V S S S N E - - P T K E A V T P A V S S M V S G L S R P E P -
Sb024977_Sorbi1    Y S S S A L P L S D M S I A P Y P I G F S - - V A T L A P S S S S P E Y I S T K D - - - P S I N Q V A S P V A A P E P V
 
AT3G06410.1     - - - - - - - - - - - - - - - - - - A E T S G D S A S V S G S I E A K T S S
Sb024977_Sorbi1    G A I L P K G V F P P D T I M R T Q T S T S V G S S S P G G G R - - - - - -
 
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