fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041702 not found in 468aa AT3G06410.1 not_1st 0.533665835 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06410.1     MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDC
gm041702_Glyma1 MEQYGR-SSEGSRSDPSPEWAGPEAQTGLEEPMWQLGM-----GGAGEESYPQRPDEVDC
                **:*** ..******** **:.  .:*.:* ***:**:     **.* ****:**** **

AT3G06410.1     IYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGAS
gm041702_Glyma1 TYYLRTGFCGFGSRCRFNHPRDRAAVAGAER-TTGEYPERVGQPVCQYYMRTRTCKFGSS
                 ******.**:************.** *. *  :*  ***:*:****::*** *****:*

AT3G06410.1     CKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQ
gm041702_Glyma1 CKYHHPRQAGGTAA-TPMSLSYYGYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQ
                ********.** .: :*:**** **************::******* **:*:**** .**

AT3G06410.1     GPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVL
gm041702_Glyma1 IPAPSPVAPSPLPVPVPSPLYSTMQPPPGPSSQQIGVLVARPPMLPGSLVQSPYG-PVVL
                 *. .*   .* * *  ..:*.*:*. . ***** *::::**.:*.** :***** *:**

AT3G06410.1     PPGMVPYSGWNPYQASLSAMPSPGTQPS-IGSSSIYGLTPLSPSATAYTGTYQ----SVP
gm041702_Glyma1 SPAMVPISGWGPYQASATGAVHPSGTPSNVGSPQLYGITQLPSPVAAYPGPYQPSGSPVG
                .*.*** ***.***** :.   *.  ** :**..:**:* *....:**.*.**    .* 

AT3G06410.1     SSNSTSKE--FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLR
gm041702_Glyma1 PSSSSQKEQAFPERSNQPEYQYYPKTGEVKFGPSYRYNPPPDMSAPKANVILSPAGLPLR
                .*.*:.**  **:*.:*** **: :**: ***.* **: * *  .**:.::**. *****

AT3G06410.1     PGVA-QCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPIGS--SSLSG
gm041702_Glyma1 PGAAPACIHYAQHGVCKFGSACKFDHHM-GSLSYSPSASSLADMPVAPYPVGSTISTL--
                **.*  * *:****:****.****** * .***********:********:**  *:*  

AT3G06410.1     SSAPVSSSNE--------PTKEAVTPAVSSMVSGLSRPEPAETSGDSASVSGSIEAKTSS
gm041702_Glyma1 --APSSSSSELRPELTSGSSKESVPSRMSSSTLTGTQP-PSQSSGPLATVISTTSSNVSP
                  ** ***.*        .:**:*.. :** .   ::* *:::**  *:* .: .::.*.

AT3G06410.1     ---
gm041702_Glyma1 TST
BoxShade v3.31 C (beta, 970507) Output
AT3G06410.1     M E R Y G R P G E E G S R S D P S L E W T S H G G E T A V E A P M W R L G L S G G G G G G G G G E S Y P E R P D E P D C
gm041702_Glyma1    M E Q Y G R - S S E G S R S D P S P E W A G P E A Q T G L E E P M W Q L G M - - - - - G G A G E E S Y P Q R P D E V D C
 
AT3G06410.1     I Y Y L R T G V C G Y G S R C R F N H P R D R G A V I G G V R G E A G A L P E R M G H P V C Q H F M R T G T C K F G A S
gm041702_Glyma1    T Y Y L R T G F C G F G S R C R F N H P R D R A A V A G A E R - T T G E Y P E R V G Q P V C Q Y Y M R T R T C K F G S S
 
AT3G06410.1     C K Y H H P R Q G G G G G S V A P V S L S Y L G Y P L R P G E K E C S Y Y L R T G Q C K F G L T C R F N H P V P L A V Q
gm041702_Glyma1    C K Y H H P R Q A G G T A A - T P M S L S Y Y G Y P L R P G E K E C S Y Y V K T G Q C K F G A T C K F H H P V P A G V Q
 
AT3G06410.1     G P P Q Q P Q Q Q Q P Q P Q P Q L Q T I Y P T L Q S Q S I P S S Q Q Y G L V L T R P S F L T G S Y L Q S P Y G P P M V L
gm041702_Glyma1    I P A P S P V A P S P L P V P V P S P L Y S T M Q P P P G P S S Q Q I G V L V A R P P M L P G S L V Q S P Y G - P V V L
 
AT3G06410.1     P P G M V P Y S G W N P Y Q A S L S A M P S P G T Q P S - I G S S S I Y G L T P L S P S A T A Y T G T Y Q - - - - S V P
gm041702_Glyma1    S P A M V P I S G W G P Y Q A S A T G A V H P S G T P S N V G S P Q L Y G I T Q L P S P V A A Y P G P Y Q P S G S P V G
 
AT3G06410.1     S S N S T S K E - - F P Q R P D Q P E C Q Y F M R T G D C K F G S S C R Y H H P V D A V P P K T G I V L S S I G L P L R
gm041702_Glyma1    P S S S S Q K E Q A F P E R S N Q P E Y Q Y Y P K T G E V K F G P S Y R Y N P P P D M S A P K A N V I L S P A G L P L R
 
AT3G06410.1     P G V A - Q C T H F A Q H G I C K F G P A C K F D H S M S S S L S Y S P S A S S L T D M P V A P Y P I G S - - S S L S G
gm041702_Glyma1    P G A A P A C I H Y A Q H G V C K F G S A C K F D H H M - G S L S Y S P S A S S L A D M P V A P Y P V G S T I S T L - -
 
AT3G06410.1     S S A P V S S S N E - - - - - - - - P T K E A V T P A V S S M V S G L S R P E P A E T S G D S A S V S G S I E A K T S S
gm041702_Glyma1    - - A P S S S S S E L R P E L T S G S S K E S V P S R M S S S T L T G T Q P - P S Q S S G P L A T V I S T T S S N V S P
 
AT3G06410.1     - - -
gm041702_Glyma1    T S T
 
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