fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026430 not found in 221aa AT5G49620.1 not_not 0.400715563 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06490.1     MDEKGRSLK-NNNMEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKS
gm026430_Glyma1 -------MKWNKHNEKEMGMRKGPWAVEEDTILVNYIATHGEGHWNSVARC--LRRSGKS
                       :* *:: *.**.:::***:.***  *:*****:***:***::**  *:*:***

AT3G06490.1     CRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRV
gm026430_Glyma1 CRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRV
                ********************:**:***:************** *****************

AT3G06490.1     QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCI
gm026430_Glyma1 IKQAKQLKCDVNSKQFRDTLRYVWMPRLLERLQPTSQA----------------------
                 *:**********:**:**::*:*****:**:*.:* :                      

AT3G06490.1     TTSNNQFMNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYS
gm026430_Glyma1 -----------------------------LEPNQSGLVLHASSSLL-------PSNSDHS
                                             : *::*.:.: .:*.*        *. . :*

AT3G06490.1     GQMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLW
gm026430_Glyma1 IERGSDLWPGFN---NQML-----------------LEQGSGGDLLE----------SLW
                 : *.. :*. *   .*:*                 ::: *. . :*          ***

AT3G06490.1     NIGETDEEFWFLQQ-----QQQFNNNGSF
gm026430_Glyma1 D----DDNMCFLQQLSYDLQMK-------
                :    *::: ****     * :
BoxShade v3.31 C (beta, 970507) Output
AT3G06490.1     M D E K G R S L K - N N N M E D E M D L K R G P W T A E E D F K L M N Y I A T N G E G R W N S L S R C A G L Q R T G K S
gm026430_Glyma1    - - - - - - - M K W N K H N E K E M G M R K G P W A V E E D T I L V N Y I A T H G E G H W N S V A R C - - L R R S G K S
 
AT3G06490.1     C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H S R W G N R W S K I A Q Y L P G R T D N E I K N Y W R T R V
gm026430_Glyma1    C R L R W L N Y L R P D V R R G N I T L Q E Q I L I L D L H S R W G N R W S K I A Q Q L P G R T D N E I K N Y W R T R V
 
AT3G06490.1     Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q S A S A S S A A A A T T T T T T T T G S A G T S S C I
gm026430_Glyma1    I K Q A K Q L K C D V N S K Q F R D T L R Y V W M P R L L E R L Q P T S Q A - - - - - - - - - - - - - - - - - - - - - -
 
AT3G06490.1     T T S N N Q F M N Y D Y N N N N M G Q Q F G V M S N N D Y I T P E N S S V A V S P A S D L T E Y Y S A P N P N P E Y Y S
gm026430_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L E P N Q S G L V L H A S S S L L - - - - - - - P S N S D H S
 
AT3G06490.1     G Q M G N S Y Y P D Q N L V S S Q L L P D N Y F D Y S G L L D E D L T A M Q E Q S N L S W F E N I N G A A S S S D S L W
gm026430_Glyma1    I E R G S D L W P G F N - - - N Q M L - - - - - - - - - - - - - - - - - L E Q G S G G D L L E - - - - - - - - - - S L W
 
AT3G06490.1     N I G E T D E E F W F L Q Q - - - - - Q Q Q F N N N G S F
gm026430_Glyma1    D - - - - D D N M C F L Q Q L S Y D L Q M K - - - - - - -
 
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