fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045884 not found in 214aa AT3G17100.2 1st_not 0.498392282 II
Pt040987 not found in 231aa AT3G17100.2 1st_not 0.530546623 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06590.1     -----------MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWR
pt040987_POPTR_ MMMASSTTTTSVAAVNTNANINTDRTR---RKKKKKSLLQQHQSKQNQNSQS---HAKWK
gm045884_Glyma1 MASSPSSSSSSSSSMVSNPVPNTDRSRDAKRRKKKAQLRQQLR----QEDQS---NPKWK
                            ::: ::    *. :    *:**: .  .        .. *   :.:*:

AT3G06590.1     SEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSR
pt040987_POPTR_ TEAQQQIYSSKLIQALSQVNLN--PSSSSAP---RQGRAVREVADRALAFAAKGKTRWSR
gm045884_Glyma1 SQAQQQIYSSKLRQALARVNL----GSSAPP---RRGKAVRDAADRVLAVTAKGRTRWSR
                :: **:***:** *** :*.*    .:*:.*   ::*:***:.***.**.:*:*:* ***

AT3G06590.1     AILANRIKLKFRK--QRRPR--ATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVN
pt040987_POPTR_ AILTNRIKLKFRKQQHKRQRLASSSSSGSTVVTTASNSRSSRKHKVSVLRLKGKGLPAVQ
gm045884_Glyma1 AILTNRLKLKFTK--HKRQR-----------VTITTPPTRSKKPRVSVYRLKGKGSPGVQ
                ***:**:**** *  ::* *           .. :: .  *:* :*** **: *. * *:

AT3G06590.1     RKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLL--SSYGSA----PP
pt040987_POPTR_ RKVRVLGRLVPGCRKQPLPIILEEATDYIAALEMQVKAMSAIAELLSRSSSGAGSSLEPM
gm045884_Glyma1 RKVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLL--SGGGAASTSAPP
                ****.******** *:.:*:***** *** ******:**.:: :**  *. *:.    * 

AT3G06590.1     PI-
pt040987_POPTR_ SS-
gm045884_Glyma1 SSS
                .
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - - - - - - - - - - M A S L I S D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R
pt040987_POPTR_    M M M A S S T T T T S V A A V N T N A N I N T D R T R - - - R K K K K K S L L Q Q H Q S K Q N Q N S Q S - - - H A K W K
gm045884_Glyma1    M A S S P S S S S S S S S S M V S N P V P N T D R S R D A K R R K K K A Q L R Q Q L R - - - - Q E D Q S - - - N P K W K
 
AT3G06590.1     S E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R
pt040987_POPTR_    T E A Q Q Q I Y S S K L I Q A L S Q V N L N - - P S S S S A P - - - R Q G R A V R E V A D R A L A F A A K G K T R W S R
gm045884_Glyma1    S Q A Q Q Q I Y S S K L R Q A L A R V N L - - - - G S S A P P - - - R R G K A V R D A A D R V L A V T A K G R T R W S R
 
AT3G06590.1     A I L A N R I K L K F R K - - Q R R P R - - A T M A I P A M T T V V S S S S N R S R K R R V S V L R L N K K S I P D V N
pt040987_POPTR_    A I L T N R I K L K F R K Q Q H K R Q R L A S S S S S G S T V V T T A S N S R S S R K H K V S V L R L K G K G L P A V Q
gm045884_Glyma1    A I L T N R L K L K F T K - - H K R Q R - - - - - - - - - - - V T I T T P P T R S K K P R V S V Y R L K G K G S P G V Q
 
AT3G06590.1     R K V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L - - S S Y G S A - - - - P P
pt040987_POPTR_    R K V R V L G R L V P G C R K Q P L P I I L E E A T D Y I A A L E M Q V K A M S A I A E L L S R S S S G A G S S L E P M
gm045884_Glyma1    R K V R F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L - - S G G G A A S T S A P P
 
AT3G06590.1     P I -
pt040987_POPTR_    S S -
gm045884_Glyma1    S S S
 
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