fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042156 not found in 202aa AT3G17100.2 not_not 0.482315112 III
Gm023956 not found in 202aa AT3G06590.2 not_not 0.466237942 III
Gm019296 not found in 210aa AT3G17100.2 not_not 0.456591639 III
Pt035124 not found in 229aa AT3G17100.2 not_not 0.517684887 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06590.1     ----MASLIS------DIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRS
pt035124_POPTR_ MEPSSSSAVAAAIVSTNANINTDRTR---RKKKKKSVLQQHQSKQNQNS---QSHAKWKT
gm042156_Glyma1 ---MSSSLIA------N--PTADRSRDSHRTKKKKKSLKQHQLQHEQ------SHAKWKS
gm023956_Glyma0 ---MSSSLIA------N--PTADRSRDSHRTKKKKKSIKQHQQQHD---------AKWKT
gm019296_Glyma0 -MASSSSMIS------NPVPNTDRSRDAKRRKKKAQLRQQQQRQEDQ------SNPKWKS
                     :* ::      :    :. :    * **: .  .  . : .         .:*::

AT3G06590.1     EKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRA
pt035124_POPTR_ EAQQQVYSSKLIQALSQVNLNP--STSSAP---RQGRAVREVADRALAFAAKGKTRWSRA
gm042156_Glyma1 HAQQQLYSSKLHHALARVNIS-----GDAP---RRGRAVREAADRVLAVAAKGRTRWSRA
gm023956_Glyma0 HAQQQLYSSKLHQALARVNIS-----GDAP---RRGRAVRDAADRVLAVAAKGRTRWSRA
gm019296_Glyma0 QAQQQIYSSKLRQALARVNLG----LAPPP---RRGKAVRDAADRVLAVTAKGMTRWSRA
                . **::**:** :** :*.:.     . .*   ::*:***:.***.**.:*:* * ****

AT3G06590.1     ILANRIKLKFRK--QRRPRATMAIPAMTTVVSSSSNRS-RKRRVSVLRLNKKSIPDVNRK
pt035124_POPTR_ ILTSRIKLKFRKQQHKRQRLASSSSSSPGSTTGSSSRSSRKHKVSVLRLKAKGLPAVQRK
gm042156_Glyma1 ILTNRLKLKFRKPIHKRQK-----------VVVGPGRP-KKARFSVLRLKGKTLPAVQRK
gm023956_Glyma0 ILTNRLKVKFRKPVHKRQKV----------VVVGPGRPKKKARFSVLRLRGKTLPAVQRK
gm019296_Glyma0 ILTNRLKLKFTK--HKRQR-----------LTTPPTRS-KKPRVSVYRLKGKGSPGVQRK
                **:.*:*:** *  ::* :               . *. :* :.** **. *  * *:**

AT3G06590.1     VRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGS--------APP
pt035124_POPTR_ VRVLGRLVPGCLKQPLPVILEEATDYIAALEMQVKTMTAIAELLSRSTSEASST---SEP
gm042156_Glyma1 VRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSA---AAP
gm023956_Glyma0 VRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAT--AAP
gm019296_Glyma0 VRFLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSAP
                **.*.****** *:.:******* *** ******::* :: :**    *        : *

AT3G06590.1     PI--
pt035124_POPTR_ MTS-
gm042156_Glyma1 PS--
gm023956_Glyma0 PS--
gm019296_Glyma0 PSSS
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - - - M A S L I S - - - - - - D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R S
pt035124_POPTR_    M E P S S S S A V A A A I V S T N A N I N T D R T R - - - R K K K K K S V L Q Q H Q S K Q N Q N S - - - Q S H A K W K T
gm042156_Glyma1    - - - M S S S L I A - - - - - - N - - P T A D R S R D S H R T K K K K K S L K Q H Q L Q H E Q - - - - - - S H A K W K S
gm023956_Glyma0    - - - M S S S L I A - - - - - - N - - P T A D R S R D S H R T K K K K K S I K Q H Q Q Q H D - - - - - - - - - A K W K T
gm019296_Glyma0    - M A S S S S M I S - - - - - - N P V P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q - - - - - - S N P K W K S
 
AT3G06590.1     E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R A
pt035124_POPTR_    E A Q Q Q V Y S S K L I Q A L S Q V N L N P - - S T S S A P - - - R Q G R A V R E V A D R A L A F A A K G K T R W S R A
gm042156_Glyma1    H A Q Q Q L Y S S K L H H A L A R V N I S - - - - - G D A P - - - R R G R A V R E A A D R V L A V A A K G R T R W S R A
gm023956_Glyma0    H A Q Q Q L Y S S K L H Q A L A R V N I S - - - - - G D A P - - - R R G R A V R D A A D R V L A V A A K G R T R W S R A
gm019296_Glyma0    Q A Q Q Q I Y S S K L R Q A L A R V N L G - - - - L A P P P - - - R R G K A V R D A A D R V L A V T A K G M T R W S R A
 
AT3G06590.1     I L A N R I K L K F R K - - Q R R P R A T M A I P A M T T V V S S S S N R S - R K R R V S V L R L N K K S I P D V N R K
pt035124_POPTR_    I L T S R I K L K F R K Q Q H K R Q R L A S S S S S S P G S T T G S S S R S S R K H K V S V L R L K A K G L P A V Q R K
gm042156_Glyma1    I L T N R L K L K F R K P I H K R Q K - - - - - - - - - - - V V V G P G R P - K K A R F S V L R L K G K T L P A V Q R K
gm023956_Glyma0    I L T N R L K V K F R K P V H K R Q K V - - - - - - - - - - V V V G P G R P K K K A R F S V L R L R G K T L P A V Q R K
gm019296_Glyma0    I L T N R L K L K F T K - - H K R Q R - - - - - - - - - - - L T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R K
 
AT3G06590.1     V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L S S Y G S - - - - - - - - A P P
pt035124_POPTR_    V R V L G R L V P G C L K Q P L P V I L E E A T D Y I A A L E M Q V K T M T A I A E L L S R S T S E A S S T - - - S E P
gm042156_Glyma1    V R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A - - - A A P
gm023956_Glyma0    V R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A T - - A A P
gm019296_Glyma0    V R F L A R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A P
 
AT3G06590.1     P I - -
pt035124_POPTR_    M T S -
gm042156_Glyma1    P S - -
gm023956_Glyma0    P S - -
gm019296_Glyma0    P S S S
 
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