fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040987 not found in 231aa AT3G17100.2 1st_not 0.530546623 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06590.1     --MASLISDIEPPTSTTS------------DLVRRKKRSSASSAASSRSSASSVSGEIHA
pt040987_POPTR_ MMMAS-------STTTTSVAAVNTNANINTDRTRRKKKK--KSLLQQHQSKQNQNSQSHA
                  ***       .*:***            * .****:.  .*  ..:.* .. ..: **

AT3G06590.1     RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL
pt040987_POPTR_ KWKTEAQQQIYSSKLIQALSQVNLNPSSS-----SAPRQGRAVREVADRALAFAAKGKTR
                :*::* **:***:**:***.**.**.*:*     :* ::*:****.******.:*:*:* 

AT3G06590.1     WSRAILANRIKLKFRKQRRPRATMAIPAM--TTVVSSSSN--RSRKRRVSVLRLNKKSIP
pt040987_POPTR_ WSRAILTNRIKLKFRKQQHKRQRLASSSSSGSTVVTTASNSRSSRKHKVSVLRLKGKGLP
                ******:**********:: *  :* .:   :***:::**   ***::******: *.:*

AT3G06590.1     DVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLL----SSYGSAP
pt040987_POPTR_ AVQRKVRVLGRLVPGCRKQPLPIILEEATDYIAALEMQVKAMSAIAELLSRSSSGAGSSL
                 *:************* **.:*:********* ******:**.::.:**    *. **: 

AT3G06590.1     PPI--
pt040987_POPTR_ EPMSS
                 *:
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - M A S L I S D I E P P T S T T S - - - - - - - - - - - - D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A
pt040987_POPTR_    M M M A S - - - - - - - S T T T T S V A A V N T N A N I N T D R T R R K K K K - - K S L L Q Q H Q S K Q N Q N S Q S H A
 
AT3G06590.1     R W R S E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L
pt040987_POPTR_    K W K T E A Q Q Q I Y S S K L I Q A L S Q V N L N P S S S - - - - - S A P R Q G R A V R E V A D R A L A F A A K G K T R
 
AT3G06590.1     W S R A I L A N R I K L K F R K Q R R P R A T M A I P A M - - T T V V S S S S N - - R S R K R R V S V L R L N K K S I P
pt040987_POPTR_    W S R A I L T N R I K L K F R K Q Q H K R Q R L A S S S S S G S T V V T T A S N S R S S R K H K V S V L R L K G K G L P
 
AT3G06590.1     D V N R K V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L - - - - S S Y G S A P
pt040987_POPTR_    A V Q R K V R V L G R L V P G C R K Q P L P I I L E E A T D Y I A A L E M Q V K A M S A I A E L L S R S S S G A G S S L
 
AT3G06590.1     P P I - -
pt040987_POPTR_    E P M S S
 
0