fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035124 not found in 229aa AT3G17100.2 not_not 0.517684887 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06590.1     MASLISDIEPPTST-------------TSDLVRRKKRSSASSAASSRSSASSVSGEIHAR
pt035124_POPTR_ -------MEPSSSSAVAAAIVSTNANINTDRTRRKKKK--KSVLQQHQSKQNQNSQSHAK
                       :**.:*:             .:* .****:.  .*. ..:.* .. ..: **:

AT3G06590.1     WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW
pt035124_POPTR_ WKTEAQQQVYSSKLIQALSQVNLNP--STSSAP---RQGRAVREVADRALAFAAKGKTRW
                *::* **::**:**:***.**.**.  ****:*   ::*:****.******.:*:*:* *

AT3G06590.1     SRAILANRIKLKFRKQRRPRATMA-----IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIP
pt035124_POPTR_ SRAILTSRIKLKFRKQQHKRQRLASSSSSSPGSTT--GSSSRSSRKHKVSVLRLKAKGLP
                *****:.*********:: *  :*      *. **  .***. ***::******: *.:*

AT3G06590.1     DVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLL----SSYGSAP
pt035124_POPTR_ AVQRKVRVLGRLVPGCLKQPLPVILEEATDYIAALEMQVKTMTAIAELLSRSTSEASSTS
                 *:************* **.:*********** ******::*.::.:**    *. .*:.

AT3G06590.1     PPI--
pt035124_POPTR_ EPMTS
                 *:
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     M A S L I S D I E P P T S T - - - - - - - - - - - - - T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R
pt035124_POPTR_    - - - - - - - M E P S S S S A V A A A I V S T N A N I N T D R T R R K K K K - - K S V L Q Q H Q S K Q N Q N S Q S H A K
 
AT3G06590.1     W R S E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W
pt035124_POPTR_    W K T E A Q Q Q V Y S S K L I Q A L S Q V N L N P - - S T S S A P - - - R Q G R A V R E V A D R A L A F A A K G K T R W
 
AT3G06590.1     S R A I L A N R I K L K F R K Q R R P R A T M A - - - - - I P A M T T V V S S S S N R S R K R R V S V L R L N K K S I P
pt035124_POPTR_    S R A I L T S R I K L K F R K Q Q H K R Q R L A S S S S S S P G S T T - - G S S S R S S R K H K V S V L R L K A K G L P
 
AT3G06590.1     D V N R K V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L - - - - S S Y G S A P
pt035124_POPTR_    A V Q R K V R V L G R L V P G C L K Q P L P V I L E E A T D Y I A A L E M Q V K T M T A I A E L L S R S T S E A S S T S
 
AT3G06590.1     P P I - -
pt035124_POPTR_    E P M T S
 
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