fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040987 not found in 231aa AT3G17100.2 1st_not 0.530546623 II
Pt035124 not found in 229aa AT3G17100.2 not_not 0.517684887 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06590.1     -------MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQ
pt040987_POPTR_ MMMASSTTTTSVAAVNTNANINTDRTRRKKKK--KSLLQQHQSKQNQNSQSHAKWKTEAQ
pt035124_POPTR_ -MEPSSSSAVAAAIVSTNANINTDRTRRKKKK--KSVLQQHQSKQNQNSQSHAKWKTEAQ
                        :   : :.. :. .:* .****:.  .*  ..:.* .. ..: **:*::* *

AT3G06590.1     QRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILA
pt040987_POPTR_ QQIYSSKLIQALSQVNLNP--SSSSAP---RQGRAVREVADRALAFAAKGKTRWSRAILT
pt035124_POPTR_ QQVYSSKLIQALSQVNLNP--STSSAP---RQGRAVREVADRALAFAAKGKTRWSRAILT
                *::**:**:***.**.**.  *:**:*   ::*:****.******.:*:*:* ******:

AT3G06590.1     NRIKLKFRKQRRPRATMAIPAMTT------VVSSSSNRSRKRRVSVLRLNKKSIPDVNRK
pt040987_POPTR_ NRIKLKFRKQQHKRQRLASSSSS--GSTVVTTASNSRSSRKHKVSVLRLKGKGLPAVQRK
pt035124_POPTR_ SRIKLKFRKQQHKRQRLASSSSSSPGS---TTGSSSRSSRKHKVSVLRLKAKGLPAVQRK
                .*********:: *  :* .: :       ...*.*. ***::******: *.:* *:**

AT3G06590.1     VRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLL----SSYGSAPPPI--
pt040987_POPTR_ VRVLGRLVPGCRKQPLPIILEEATDYIAALEMQVKAMSAIAELLSRSSSGAGSSLEPMSS
pt035124_POPTR_ VRVLGRLVPGCLKQPLPVILEEATDYIAALEMQVKTMTAIAELLSRSTSEASSTSEPMTS
                *********** **.:*:********* ******::*.::.:**    *  .*:  *:
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - - - - - - M A S L I S D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R S E K Q
pt040987_POPTR_    M M M A S S T T T T S V A A V N T N A N I N T D R T R R K K K K - - K S L L Q Q H Q S K Q N Q N S Q S H A K W K T E A Q
pt035124_POPTR_    - M E P S S S S A V A A A I V S T N A N I N T D R T R R K K K K - - K S V L Q Q H Q S K Q N Q N S Q S H A K W K T E A Q
 
AT3G06590.1     Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R A I L A
pt040987_POPTR_    Q Q I Y S S K L I Q A L S Q V N L N P - - S S S S A P - - - R Q G R A V R E V A D R A L A F A A K G K T R W S R A I L T
pt035124_POPTR_    Q Q V Y S S K L I Q A L S Q V N L N P - - S T S S A P - - - R Q G R A V R E V A D R A L A F A A K G K T R W S R A I L T
 
AT3G06590.1     N R I K L K F R K Q R R P R A T M A I P A M T T - - - - - - V V S S S S N R S R K R R V S V L R L N K K S I P D V N R K
pt040987_POPTR_    N R I K L K F R K Q Q H K R Q R L A S S S S S - - G S T V V T T A S N S R S S R K H K V S V L R L K G K G L P A V Q R K
pt035124_POPTR_    S R I K L K F R K Q Q H K R Q R L A S S S S S S P G S - - - T T G S S S R S S R K H K V S V L R L K A K G L P A V Q R K
 
AT3G06590.1     V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L - - - - S S Y G S A P P P I - -
pt040987_POPTR_    V R V L G R L V P G C R K Q P L P I I L E E A T D Y I A A L E M Q V K A M S A I A E L L S R S S S G A G S S L E P M S S
pt035124_POPTR_    V R V L G R L V P G C L K Q P L P V I L E E A T D Y I A A L E M Q V K T M T A I A E L L S R S T S E A S S T S E P M T S
 
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