fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045884 not found in 214aa AT3G17100.2 1st_not 0.498392282 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06590.1     MA-----------SLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWR
gm045884_Glyma1 MASSPSSSSSSSSSMVSNPVPNTDRSRDAKRRKKKAQLRQQLRQEDQSNP-------KWK
                **           *::*:  * *. : *  ****::.  .   ....:..       :*:

AT3G06590.1     SEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSR
gm045884_Glyma1 SQAQQQIYSSKLRQALARVNLGSSAPP-------RRGKAVRDAADRVLAVTAKGRTRWSR
                *: **:***:** *** :*.*.***..       :******:****.***:*:*** ***

AT3G06590.1     AILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVR
gm045884_Glyma1 AILTNRLKLKFTKHKRQRVTITTP---------PTRSKKPRVSVYRLKGKGSPGVQRKVR
                ***:**:**** *::* *.*:: *         ..**:* **** **: *. *.*:****

AT3G06590.1     VLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYG----SAPPPI-
gm045884_Glyma1 FLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGGGAASTSAPPSSS
                .******** *:.:******* *** *********.:*.:***. *    ****.
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     M A - - - - - - - - - - - S L I S D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R
gm045884_Glyma1    M A S S P S S S S S S S S S M V S N P V P N T D R S R D A K R R K K K A Q L R Q Q L R Q E D Q S N P - - - - - - - K W K
 
AT3G06590.1     S E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R
gm045884_Glyma1    S Q A Q Q Q I Y S S K L R Q A L A R V N L G S S A P P - - - - - - - R R G K A V R D A A D R V L A V T A K G R T R W S R
 
AT3G06590.1     A I L A N R I K L K F R K Q R R P R A T M A I P A M T T V V S S S S N R S R K R R V S V L R L N K K S I P D V N R K V R
gm045884_Glyma1    A I L T N R L K L K F T K H K R Q R V T I T T P - - - - - - - - - P T R S K K P R V S V Y R L K G K G S P G V Q R K V R
 
AT3G06590.1     V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L S S Y G - - - - S A P P P I -
gm045884_Glyma1    F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G G G A A S T S A P P S S S
 
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