fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042156 not found in 202aa AT3G17100.2 not_not 0.482315112 III
Gm023956 not found in 202aa AT3G06590.2 not_not 0.466237942 III
Gm019296 not found in 210aa AT3G17100.2 not_not 0.456591639 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06590.1     ---MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIY
gm023956_Glyma0 --MSSSLIAN--PTADRSRDSHRTKKKKKSIKQHQQQHD---------AKWKTHAQQQLY
gm019296_Glyma0 MASSSSMISNPVPNTDRSRDAKRRKKKAQLRQQQQRQEDQS------NPKWKSQAQQQIY
gm042156_Glyma1 --MSSSLIAN--PTADRSRDSHRTKKKKKSLKQHQLQHEQS------HAKWKSHAQQQLY
                    :*:*::  * :. : *  * **: .  .  . : .         .:*::. **::*

AT3G06590.1     SAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK
gm023956_Glyma0 SSKLHQALARVNIS-----GDAP---RRGRAVRDAADRVLAVAAKGRTRWSRAILTNRLK
gm019296_Glyma0 SSKLRQALARVNLG----LAPPP---RRGKAVRDAADRVLAVTAKGMTRWSRAILTNRLK
gm042156_Glyma1 SSKLHHALARVNIS-----GDAP---RRGRAVREAADRVLAVAAKGRTRWSRAILTNRLK
                *:** :** :*.:.     . .*   :**:***:****.***:*:* * ******:**:*

AT3G06590.1     LKFRK--QRRPRATMAIPAMTTVVSSSSNRS-RKRRVSVLRLNKKSIPDVNRKVRVLGRL
gm023956_Glyma0 VKFRKPVHKRQK----------VVVVGPGRPKKKARFSVLRLRGKTLPAVQRKVRVLGRL
gm019296_Glyma0 LKFTK--HKRQR-----------LTTPPTRS-KKPRVSVYRLKGKGSPGVQRKVRFLARL
gm042156_Glyma1 LKFRKPIHKRQK-----------VVVGPGRP-KKARFSVLRLKGKTLPAVQRKVRVLGRL
                :** *  ::* :           :   . *. :* *.** **. *  * *:****.*.**

AT3G06590.1     VPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYG---------SAPPPI-
gm023956_Glyma0 VPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAT--AAPPS--
gm019296_Glyma0 VPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSAPPSSS
gm042156_Glyma1 VPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSA---AAPPS--
                **** *:.:******* *** *********.:* :** . .         :***.
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - - M A S L I S D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R S E K Q Q R I Y
gm023956_Glyma0    - - M S S S L I A N - - P T A D R S R D S H R T K K K K K S I K Q H Q Q Q H D - - - - - - - - - A K W K T H A Q Q Q L Y
gm019296_Glyma0    M A S S S S M I S N P V P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q S - - - - - - N P K W K S Q A Q Q Q I Y
gm042156_Glyma1    - - M S S S L I A N - - P T A D R S R D S H R T K K K K K S L K Q H Q L Q H E Q S - - - - - - H A K W K S H A Q Q Q L Y
 
AT3G06590.1     S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R A I L A N R I K
gm023956_Glyma0    S S K L H Q A L A R V N I S - - - - - G D A P - - - R R G R A V R D A A D R V L A V A A K G R T R W S R A I L T N R L K
gm019296_Glyma0    S S K L R Q A L A R V N L G - - - - L A P P P - - - R R G K A V R D A A D R V L A V T A K G M T R W S R A I L T N R L K
gm042156_Glyma1    S S K L H H A L A R V N I S - - - - - G D A P - - - R R G R A V R E A A D R V L A V A A K G R T R W S R A I L T N R L K
 
AT3G06590.1     L K F R K - - Q R R P R A T M A I P A M T T V V S S S S N R S - R K R R V S V L R L N K K S I P D V N R K V R V L G R L
gm023956_Glyma0    V K F R K P V H K R Q K - - - - - - - - - - V V V V G P G R P K K K A R F S V L R L R G K T L P A V Q R K V R V L G R L
gm019296_Glyma0    L K F T K - - H K R Q R - - - - - - - - - - - L T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R K V R F L A R L
gm042156_Glyma1    L K F R K P I H K R Q K - - - - - - - - - - - V V V G P G R P - K K A R F S V L R L K G K T L P A V Q R K V R V L G R L
 
AT3G06590.1     V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L S S Y G - - - - - - - - - S A P P P I -
gm023956_Glyma0    V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A T - - A A P P S - -
gm019296_Glyma0    V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A P P S S S
gm042156_Glyma1    V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G S S S A S T S A - - - A A P P S - -
 
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