fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045884 not found in 214aa AT3G17100.2 1st_not 0.498392282 II
Gm042156 not found in 202aa AT3G17100.2 not_not 0.482315112 III
Gm023956 not found in 202aa AT3G06590.2 not_not 0.466237942 III
Gm019296 not found in 210aa AT3G17100.2 not_not 0.456591639 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06590.1     -----------MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWR
gm042156_Glyma1 ----------MSSSLIAN--PTADRSRDSHRTKKKKKSLKQHQLQHEQS------HAKWK
gm023956_Glyma0 ----------MSSSLIAN--PTADRSRDSHRTKKKKKSIKQHQQQHD---------AKWK
gm019296_Glyma0 MA--------SSSSMISNPVPNTDRSRDAKRRKKKAQLRQQQQRQEDQS------NPKWK
gm045884_Glyma1 MASSPSSSSSSSSSMVSNPVPNTDRSRDAKRRKKKAQLR-QQLRQEDQS------NPKWK
                            :*::::  * :. : *  * **: .       : .         .:*:

AT3G06590.1     SEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSR
gm042156_Glyma1 SHAQQQLYSSKLHHALARVNISGDA--------PRRGRAVREAADRVLAVAAKGRTRWSR
gm023956_Glyma0 THAQQQLYSSKLHQALARVNISGDA--------PRRGRAVRDAADRVLAVAAKGRTRWSR
gm019296_Glyma0 SQAQQQIYSSKLRQALARVNLGLAPP-------PRRGKAVRDAADRVLAVTAKGMTRWSR
gm045884_Glyma1 SQAQQQIYSSKLRQALARVNLGSSAP-------PRRGKAVRDAADRVLAVTAKGRTRWSR
                :. **::**:** :** :*.:.  .         :**:***:****.***:*:* * ***

AT3G06590.1     AILANRIKLKFRK--QRRPRATMAIPAMTTVVSSSSNRS-RKRRVSVLRLNKKSIPDVNR
gm042156_Glyma1 AILTNRLKLKFRKPIHKRQK-----------VVVGPGRP-KKARFSVLRLKGKTLPAVQR
gm023956_Glyma0 AILTNRLKVKFRKPVHKRQKV----------VVVGPGRPKKKARFSVLRLRGKTLPAVQR
gm019296_Glyma0 AILTNRLKLKFTK--HKRQR-----------LTTPPTRS-KKPRVSVYRLKGKGSPGVQR
gm045884_Glyma1 AILTNRLKLKFTK--HKRQRV---------TITTPPTRS-KKPRVSVYRLKGKGSPGVQR
                ***:**:*:** *  ::* :           :   . *. :* *.** **. *  * *:*

AT3G06590.1     KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLL----SSYG-----SA
gm042156_Glyma1 KVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLG--SSSASTSA-AA
gm023956_Glyma0 KVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLG--SSSASTSATAA
gm019296_Glyma0 KVRFLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSA
gm045884_Glyma1 KVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSG-----GGAASTSA
                ***.*.****** *:.:******* *** *********.:* :**       .     :*

AT3G06590.1     PPPI-
gm042156_Glyma1 PPS--
gm023956_Glyma0 PPS--
gm019296_Glyma0 PPSSS
gm045884_Glyma1 PPSSS
                **.
BoxShade v3.31 C (beta, 970507) Output
AT3G06590.1     - - - - - - - - - - - M A S L I S D I E P P T S T T S D L V R R K K R S S A S S A A S S R S S A S S V S G E I H A R W R
gm042156_Glyma1    - - - - - - - - - - M S S S L I A N - - P T A D R S R D S H R T K K K K K S L K Q H Q L Q H E Q S - - - - - - H A K W K
gm023956_Glyma0    - - - - - - - - - - M S S S L I A N - - P T A D R S R D S H R T K K K K K S I K Q H Q Q Q H D - - - - - - - - - A K W K
gm019296_Glyma0    M A - - - - - - - - S S S S M I S N P V P N T D R S R D A K R R K K K A Q L R Q Q Q Q R Q E D Q S - - - - - - N P K W K
gm045884_Glyma1    M A S S P S S S S S S S S S M V S N P V P N T D R S R D A K R R K K K A Q L R - Q Q L R Q E D Q S - - - - - - N P K W K
 
AT3G06590.1     S E K Q Q R I Y S A K L F Q A L Q Q V R L N S S A S T S S S P T A Q K R G K A V R E A A D R A L A V S A R G R T L W S R
gm042156_Glyma1    S H A Q Q Q L Y S S K L H H A L A R V N I S G D A - - - - - - - - P R R G R A V R E A A D R V L A V A A K G R T R W S R
gm023956_Glyma0    T H A Q Q Q L Y S S K L H Q A L A R V N I S G D A - - - - - - - - P R R G R A V R D A A D R V L A V A A K G R T R W S R
gm019296_Glyma0    S Q A Q Q Q I Y S S K L R Q A L A R V N L G L A P P - - - - - - - P R R G K A V R D A A D R V L A V T A K G M T R W S R
gm045884_Glyma1    S Q A Q Q Q I Y S S K L R Q A L A R V N L G S S A P - - - - - - - P R R G K A V R D A A D R V L A V T A K G R T R W S R
 
AT3G06590.1     A I L A N R I K L K F R K - - Q R R P R A T M A I P A M T T V V S S S S N R S - R K R R V S V L R L N K K S I P D V N R
gm042156_Glyma1    A I L T N R L K L K F R K P I H K R Q K - - - - - - - - - - - V V V G P G R P - K K A R F S V L R L K G K T L P A V Q R
gm023956_Glyma0    A I L T N R L K V K F R K P V H K R Q K V - - - - - - - - - - V V V G P G R P K K K A R F S V L R L R G K T L P A V Q R
gm019296_Glyma0    A I L T N R L K L K F T K - - H K R Q R - - - - - - - - - - - L T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R
gm045884_Glyma1    A I L T N R L K L K F T K - - H K R Q R V - - - - - - - - - T I T T P P T R S - K K P R V S V Y R L K G K G S P G V Q R
 
AT3G06590.1     K V R V L G R L V P G C G K Q S V P V I L E E A T D Y I Q A L E M Q V R A M N S L V Q L L - - - - S S Y G - - - - - S A
gm042156_Glyma1    K V R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G - - S S S A S T S A - A A
gm023956_Glyma0    K V R V L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M Q A L A D L L L G - - S S S A S T S A T A A
gm019296_Glyma0    K V R F L A R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G S S S S S G A A A S P S A
gm045884_Glyma1    K V R F L G R L V P G C R K E P L P V I L E E A I D Y I P A L E M Q V R A M S A L F N L L S G - - - - - G G A A S T S A
 
AT3G06590.1     P P P I -
gm042156_Glyma1    P P S - -
gm023956_Glyma0    P P S - -
gm019296_Glyma0    P P S S S
gm045884_Glyma1    P P S S S
 
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